Hb_096267_010

Information

Type -
Description -
Location Contig96267: 2079-2618
Sequence    

Annotation

kegg
ID tcc:TCM_042633
description UDP-glucosyltransferase family 1 protein
nr
ID XP_006379615.1
description hypothetical protein POPTR_0008s06270g [Populus trichocarpa]
swissprot
ID U3U992
description 7-deoxyloganetic acid glucosyltransferase OS=Catharanthus roseus GN=UGT709C2 PE=1 SV=1
trembl
ID U5G7K2
description Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s06270g PE=3 SV=1
Gene Ontology
ID GO:0016758
description udp-glucosyltransferase family 1 protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_096267_010 0.0 - - hypothetical protein POPTR_0008s06270g [Populus trichocarpa]
2 Hb_000011_510 0.0396884576 - - Esterase precursor, putative [Ricinus communis]
3 Hb_006555_020 0.0459433744 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 55-like [Jatropha curcas]
4 Hb_004724_440 0.0459949214 - - conserved hypothetical protein [Ricinus communis]
5 Hb_099335_010 0.0489164516 - - PREDICTED: UDP-glycosyltransferase 76C2-like [Populus euphratica]
6 Hb_015807_120 0.0528355775 - - PREDICTED: photosynthetic NDH subunit of lumenal location 3, chloroplastic [Jatropha curcas]
7 Hb_071557_010 0.0588413866 - - hypothetical protein POPTR_0008s06270g [Populus trichocarpa]
8 Hb_003392_060 0.0601465109 - - Flavonol 4'-sulfotransferase, putative [Ricinus communis]
9 Hb_040323_010 0.0611147579 - - -
10 Hb_048476_090 0.0615407517 - - conserved hypothetical protein [Ricinus communis]
11 Hb_005618_030 0.0629947959 - - PREDICTED: cytochrome P450 734A1-like [Jatropha curcas]
12 Hb_004235_070 0.0640140631 - - acyl carrier protein, putative [Ricinus communis]
13 Hb_006261_020 0.0641255948 - - Vacuolar cation/proton exchanger 1a, putative [Ricinus communis]
14 Hb_171810_030 0.0654089747 - - PREDICTED: oligopeptide transporter 6-like [Jatropha curcas]
15 Hb_000740_010 0.066117569 - - cytochrome P450, putative [Ricinus communis]
16 Hb_000191_090 0.07090388 transcription factor TF Family: MYB GHMYB10, putative [Theobroma cacao]
17 Hb_014361_160 0.074466481 transcription factor TF Family: GRAS SCL domain class transcription factor [Theobroma cacao]
18 Hb_000030_070 0.0778734731 - - conserved hypothetical protein [Ricinus communis]
19 Hb_001638_060 0.0785977605 - - PREDICTED: rho GTPase-activating protein 3-like isoform X1 [Populus euphratica]
20 Hb_001377_080 0.0802320799 - - PREDICTED: uncharacterized protein LOC105642864 [Jatropha curcas]

Gene co-expression network

sample Hb_096267_010 Hb_096267_010 Hb_000011_510 Hb_000011_510 Hb_096267_010--Hb_000011_510 Hb_006555_020 Hb_006555_020 Hb_096267_010--Hb_006555_020 Hb_004724_440 Hb_004724_440 Hb_096267_010--Hb_004724_440 Hb_099335_010 Hb_099335_010 Hb_096267_010--Hb_099335_010 Hb_015807_120 Hb_015807_120 Hb_096267_010--Hb_015807_120 Hb_071557_010 Hb_071557_010 Hb_096267_010--Hb_071557_010 Hb_000011_510--Hb_099335_010 Hb_048476_090 Hb_048476_090 Hb_000011_510--Hb_048476_090 Hb_000011_510--Hb_071557_010 Hb_003392_060 Hb_003392_060 Hb_000011_510--Hb_003392_060 Hb_000740_010 Hb_000740_010 Hb_000011_510--Hb_000740_010 Hb_000030_070 Hb_000030_070 Hb_006555_020--Hb_000030_070 Hb_005618_030 Hb_005618_030 Hb_006555_020--Hb_005618_030 Hb_001377_080 Hb_001377_080 Hb_006555_020--Hb_001377_080 Hb_006555_020--Hb_000011_510 Hb_006555_020--Hb_048476_090 Hb_040323_010 Hb_040323_010 Hb_004724_440--Hb_040323_010 Hb_171810_030 Hb_171810_030 Hb_004724_440--Hb_171810_030 Hb_000191_090 Hb_000191_090 Hb_004724_440--Hb_000191_090 Hb_004724_440--Hb_000011_510 Hb_004724_440--Hb_003392_060 Hb_099335_010--Hb_048476_090 Hb_099335_010--Hb_071557_010 Hb_099335_010--Hb_000740_010 Hb_099335_010--Hb_003392_060 Hb_015807_120--Hb_003392_060 Hb_015807_120--Hb_071557_010 Hb_004235_070 Hb_004235_070 Hb_015807_120--Hb_004235_070 Hb_015807_120--Hb_000740_010 Hb_011433_010 Hb_011433_010 Hb_015807_120--Hb_011433_010 Hb_001638_060 Hb_001638_060 Hb_015807_120--Hb_001638_060 Hb_071557_010--Hb_000740_010 Hb_071557_010--Hb_003392_060 Hb_071557_010--Hb_048476_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0957951 17.2593 1.3059 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 13.632

CAGE analysis