Hb_000740_010

Information

Type -
Description -
Location Contig740: 11644-14265
Sequence    

Annotation

kegg
ID rcu:RCOM_0342960
description cytochrome P450, putative (EC:1.14.13.76)
nr
ID XP_002523409.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID Q50EK1
description Cytochrome P450 716B1 OS=Picea sitchensis GN=CYP716B1 PE=2 SV=1
trembl
ID B9SBP0
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_0342960 PE=3 SV=1
Gene Ontology
ID GO:0005506
description beta-amyrin 28-oxidase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000740_010 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_071557_010 0.0140777416 - - hypothetical protein POPTR_0008s06270g [Populus trichocarpa]
3 Hb_048476_090 0.0336508323 - - conserved hypothetical protein [Ricinus communis]
4 Hb_099335_010 0.0350309814 - - PREDICTED: UDP-glycosyltransferase 76C2-like [Populus euphratica]
5 Hb_004235_070 0.0374701337 - - acyl carrier protein, putative [Ricinus communis]
6 Hb_003392_060 0.0397580097 - - Flavonol 4'-sulfotransferase, putative [Ricinus communis]
7 Hb_015807_120 0.0417237202 - - PREDICTED: photosynthetic NDH subunit of lumenal location 3, chloroplastic [Jatropha curcas]
8 Hb_002006_080 0.0430006955 - - PREDICTED: CRAL-TRIO domain-containing protein YKL091C-like isoform X2 [Citrus sinensis]
9 Hb_006261_020 0.0462827061 - - Vacuolar cation/proton exchanger 1a, putative [Ricinus communis]
10 Hb_000011_510 0.0476522769 - - Esterase precursor, putative [Ricinus communis]
11 Hb_000414_040 0.0584158789 - - hypothetical protein POPTR_0009s13250g [Populus trichocarpa]
12 Hb_001638_060 0.0586263269 - - PREDICTED: rho GTPase-activating protein 3-like isoform X1 [Populus euphratica]
13 Hb_011433_010 0.0588623565 - - PREDICTED: (R)-mandelonitrile lyase-like [Populus euphratica]
14 Hb_005797_020 0.0642169011 - - PREDICTED: BAG family molecular chaperone regulator 1-like [Jatropha curcas]
15 Hb_000210_210 0.0646537181 - - PREDICTED: uncharacterized protein LOC105635822 isoform X1 [Jatropha curcas]
16 Hb_096267_010 0.066117569 - - hypothetical protein POPTR_0008s06270g [Populus trichocarpa]
17 Hb_014361_160 0.0670202439 transcription factor TF Family: GRAS SCL domain class transcription factor [Theobroma cacao]
18 Hb_171810_030 0.0689161996 - - PREDICTED: oligopeptide transporter 6-like [Jatropha curcas]
19 Hb_000979_210 0.0698176075 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001284_050 0.0702200905 - - PREDICTED: uncharacterized protein LOC100781779 isoform X1 [Glycine max]

Gene co-expression network

sample Hb_000740_010 Hb_000740_010 Hb_071557_010 Hb_071557_010 Hb_000740_010--Hb_071557_010 Hb_048476_090 Hb_048476_090 Hb_000740_010--Hb_048476_090 Hb_099335_010 Hb_099335_010 Hb_000740_010--Hb_099335_010 Hb_004235_070 Hb_004235_070 Hb_000740_010--Hb_004235_070 Hb_003392_060 Hb_003392_060 Hb_000740_010--Hb_003392_060 Hb_015807_120 Hb_015807_120 Hb_000740_010--Hb_015807_120 Hb_071557_010--Hb_003392_060 Hb_071557_010--Hb_099335_010 Hb_071557_010--Hb_015807_120 Hb_071557_010--Hb_048476_090 Hb_000011_510 Hb_000011_510 Hb_071557_010--Hb_000011_510 Hb_048476_090--Hb_099335_010 Hb_048476_090--Hb_000011_510 Hb_001284_050 Hb_001284_050 Hb_048476_090--Hb_001284_050 Hb_006261_020 Hb_006261_020 Hb_048476_090--Hb_006261_020 Hb_099335_010--Hb_000011_510 Hb_096267_010 Hb_096267_010 Hb_099335_010--Hb_096267_010 Hb_099335_010--Hb_003392_060 Hb_004235_070--Hb_006261_020 Hb_004235_070--Hb_015807_120 Hb_004235_070--Hb_071557_010 Hb_001638_060 Hb_001638_060 Hb_004235_070--Hb_001638_060 Hb_002006_080 Hb_002006_080 Hb_004235_070--Hb_002006_080 Hb_011433_010 Hb_011433_010 Hb_003392_060--Hb_011433_010 Hb_014361_160 Hb_014361_160 Hb_003392_060--Hb_014361_160 Hb_171810_030 Hb_171810_030 Hb_003392_060--Hb_171810_030 Hb_003392_060--Hb_015807_120 Hb_015807_120--Hb_011433_010 Hb_015807_120--Hb_001638_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 1.55503 0.158481 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 1.00483

CAGE analysis