Hb_000011_510

Information

Type -
Description -
Location Contig11: 510482-514506
Sequence    

Annotation

kegg
ID rcu:RCOM_0309620
description Esterase precursor, putative
nr
ID XP_002534586.1
description Esterase precursor, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9T8L7
description Esterase, putative OS=Ricinus communis GN=RCOM_0309620 PE=4 SV=1
Gene Ontology
ID GO:0016788
description gdsl esterase lipase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000011_510 0.0 - - Esterase precursor, putative [Ricinus communis]
2 Hb_099335_010 0.0207967241 - - PREDICTED: UDP-glycosyltransferase 76C2-like [Populus euphratica]
3 Hb_096267_010 0.0396884576 - - hypothetical protein POPTR_0008s06270g [Populus trichocarpa]
4 Hb_048476_090 0.0399701571 - - conserved hypothetical protein [Ricinus communis]
5 Hb_071557_010 0.0403395918 - - hypothetical protein POPTR_0008s06270g [Populus trichocarpa]
6 Hb_003392_060 0.04751582 - - Flavonol 4'-sulfotransferase, putative [Ricinus communis]
7 Hb_000740_010 0.0476522769 - - cytochrome P450, putative [Ricinus communis]
8 Hb_004724_440 0.0495711036 - - conserved hypothetical protein [Ricinus communis]
9 Hb_040323_010 0.0560004976 - - -
10 Hb_015807_120 0.0588966869 - - PREDICTED: photosynthetic NDH subunit of lumenal location 3, chloroplastic [Jatropha curcas]
11 Hb_171810_030 0.0590439068 - - PREDICTED: oligopeptide transporter 6-like [Jatropha curcas]
12 Hb_006555_020 0.0633831502 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 55-like [Jatropha curcas]
13 Hb_004235_070 0.0661329705 - - acyl carrier protein, putative [Ricinus communis]
14 Hb_006261_020 0.0680695929 - - Vacuolar cation/proton exchanger 1a, putative [Ricinus communis]
15 Hb_014361_160 0.0683093491 transcription factor TF Family: GRAS SCL domain class transcription factor [Theobroma cacao]
16 Hb_011433_010 0.0735034019 - - PREDICTED: (R)-mandelonitrile lyase-like [Populus euphratica]
17 Hb_001284_050 0.0764012014 - - PREDICTED: uncharacterized protein LOC100781779 isoform X1 [Glycine max]
18 Hb_000191_090 0.082673611 transcription factor TF Family: MYB GHMYB10, putative [Theobroma cacao]
19 Hb_001638_060 0.0842737308 - - PREDICTED: rho GTPase-activating protein 3-like isoform X1 [Populus euphratica]
20 Hb_005797_020 0.087961985 - - PREDICTED: BAG family molecular chaperone regulator 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_000011_510 Hb_000011_510 Hb_099335_010 Hb_099335_010 Hb_000011_510--Hb_099335_010 Hb_096267_010 Hb_096267_010 Hb_000011_510--Hb_096267_010 Hb_048476_090 Hb_048476_090 Hb_000011_510--Hb_048476_090 Hb_071557_010 Hb_071557_010 Hb_000011_510--Hb_071557_010 Hb_003392_060 Hb_003392_060 Hb_000011_510--Hb_003392_060 Hb_000740_010 Hb_000740_010 Hb_000011_510--Hb_000740_010 Hb_099335_010--Hb_048476_090 Hb_099335_010--Hb_071557_010 Hb_099335_010--Hb_000740_010 Hb_099335_010--Hb_096267_010 Hb_099335_010--Hb_003392_060 Hb_006555_020 Hb_006555_020 Hb_096267_010--Hb_006555_020 Hb_004724_440 Hb_004724_440 Hb_096267_010--Hb_004724_440 Hb_015807_120 Hb_015807_120 Hb_096267_010--Hb_015807_120 Hb_096267_010--Hb_071557_010 Hb_048476_090--Hb_000740_010 Hb_048476_090--Hb_071557_010 Hb_001284_050 Hb_001284_050 Hb_048476_090--Hb_001284_050 Hb_006261_020 Hb_006261_020 Hb_048476_090--Hb_006261_020 Hb_071557_010--Hb_000740_010 Hb_071557_010--Hb_003392_060 Hb_071557_010--Hb_015807_120 Hb_011433_010 Hb_011433_010 Hb_003392_060--Hb_011433_010 Hb_014361_160 Hb_014361_160 Hb_003392_060--Hb_014361_160 Hb_171810_030 Hb_171810_030 Hb_003392_060--Hb_171810_030 Hb_003392_060--Hb_015807_120 Hb_003392_060--Hb_000740_010 Hb_004235_070 Hb_004235_070 Hb_000740_010--Hb_004235_070 Hb_000740_010--Hb_015807_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.129654 0.00951433 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.0978091

CAGE analysis