Hb_004093_030

Information

Type -
Description -
Location Contig4093: 43538-45106
Sequence    

Annotation

kegg
ID rcu:RCOM_1406750
description hypothetical protein
nr
ID XP_002528407.1
description hypothetical protein RCOM_1406750 [Ricinus communis]
swissprot
ID Q9FG14
description Myosin-binding protein 7 OS=Arabidopsis thaliana GN=MYOB7 PE=1 SV=1
trembl
ID B9SQY8
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1406750 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004093_030 0.0 - - hypothetical protein RCOM_1406750 [Ricinus communis]
2 Hb_001817_040 0.1454560619 - - myosin XI, putative [Ricinus communis]
3 Hb_011033_010 0.1556690614 - - ATP-binding cassette transporter, putative [Ricinus communis]
4 Hb_001266_150 0.1567688545 - - hypothetical protein JCGZ_14961 [Jatropha curcas]
5 Hb_000061_430 0.1671010704 - - conserved hypothetical protein [Ricinus communis]
6 Hb_028487_060 0.1689672267 - - PREDICTED: 21 kDa protein-like [Jatropha curcas]
7 Hb_011457_120 0.1713370686 - - PREDICTED: sulfate transporter 3.1-like [Jatropha curcas]
8 Hb_000120_930 0.1729362736 - - PREDICTED: G2/mitotic-specific cyclin-2-like isoform X2 [Jatropha curcas]
9 Hb_001140_190 0.1753130472 - - PREDICTED: A-kinase anchor protein 9 [Jatropha curcas]
10 Hb_004143_090 0.1755633276 - - PREDICTED: VIN3-like protein 2 isoform X1 [Jatropha curcas]
11 Hb_002267_060 0.1773113238 transcription factor TF Family: ERF PREDICTED: dehydration-responsive element-binding protein 3 [Jatropha curcas]
12 Hb_010288_030 0.1799778033 - - PREDICTED: uncharacterized protein LOC105642607 [Jatropha curcas]
13 Hb_000438_160 0.1809601464 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001186_100 0.1816197162 - - PREDICTED: uncharacterized protein LOC105640806 isoform X1 [Jatropha curcas]
15 Hb_005890_020 0.1836728255 - - putative plant disease resistance family protein [Populus trichocarpa]
16 Hb_000020_040 0.1841804492 - - S-adenosylmethionine-dependent methyltransferase, putative [Ricinus communis]
17 Hb_018133_070 0.1849110157 - - PREDICTED: RING-H2 finger protein ATL43 [Jatropha curcas]
18 Hb_000321_170 0.1850059759 - - PREDICTED: glucan endo-1,3-beta-glucosidase 11-like [Jatropha curcas]
19 Hb_000497_250 0.1855674953 - - PREDICTED: potassium transporter 5 [Jatropha curcas]
20 Hb_059567_010 0.1862865319 - - PREDICTED: transcription factor PAR2-like [Jatropha curcas]

Gene co-expression network

sample Hb_004093_030 Hb_004093_030 Hb_001817_040 Hb_001817_040 Hb_004093_030--Hb_001817_040 Hb_011033_010 Hb_011033_010 Hb_004093_030--Hb_011033_010 Hb_001266_150 Hb_001266_150 Hb_004093_030--Hb_001266_150 Hb_000061_430 Hb_000061_430 Hb_004093_030--Hb_000061_430 Hb_028487_060 Hb_028487_060 Hb_004093_030--Hb_028487_060 Hb_011457_120 Hb_011457_120 Hb_004093_030--Hb_011457_120 Hb_001504_210 Hb_001504_210 Hb_001817_040--Hb_001504_210 Hb_000847_130 Hb_000847_130 Hb_001817_040--Hb_000847_130 Hb_001140_190 Hb_001140_190 Hb_001817_040--Hb_001140_190 Hb_000748_120 Hb_000748_120 Hb_001817_040--Hb_000748_120 Hb_000071_060 Hb_000071_060 Hb_001817_040--Hb_000071_060 Hb_004007_140 Hb_004007_140 Hb_001817_040--Hb_004007_140 Hb_010288_030 Hb_010288_030 Hb_011033_010--Hb_010288_030 Hb_071674_010 Hb_071674_010 Hb_011033_010--Hb_071674_010 Hb_011033_010--Hb_000061_430 Hb_005890_020 Hb_005890_020 Hb_011033_010--Hb_005890_020 Hb_012055_080 Hb_012055_080 Hb_011033_010--Hb_012055_080 Hb_018133_070 Hb_018133_070 Hb_011033_010--Hb_018133_070 Hb_000932_110 Hb_000932_110 Hb_001266_150--Hb_000932_110 Hb_059567_010 Hb_059567_010 Hb_001266_150--Hb_059567_010 Hb_001266_150--Hb_001140_190 Hb_000352_010 Hb_000352_010 Hb_001266_150--Hb_000352_010 Hb_001266_150--Hb_010288_030 Hb_136441_010 Hb_136441_010 Hb_000061_430--Hb_136441_010 Hb_000061_430--Hb_005890_020 Hb_001347_030 Hb_001347_030 Hb_000061_430--Hb_001347_030 Hb_019973_010 Hb_019973_010 Hb_000061_430--Hb_019973_010 Hb_000061_430--Hb_010288_030 Hb_002267_060 Hb_002267_060 Hb_028487_060--Hb_002267_060 Hb_000321_170 Hb_000321_170 Hb_028487_060--Hb_000321_170 Hb_033720_030 Hb_033720_030 Hb_028487_060--Hb_033720_030 Hb_000261_070 Hb_000261_070 Hb_028487_060--Hb_000261_070 Hb_000342_040 Hb_000342_040 Hb_028487_060--Hb_000342_040 Hb_005496_040 Hb_005496_040 Hb_028487_060--Hb_005496_040 Hb_002942_150 Hb_002942_150 Hb_011457_120--Hb_002942_150 Hb_000020_040 Hb_000020_040 Hb_011457_120--Hb_000020_040 Hb_011457_120--Hb_059567_010 Hb_000206_030 Hb_000206_030 Hb_011457_120--Hb_000206_030 Hb_011457_120--Hb_001266_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.101868 0.0248976 0.740522 0.563874 0.0136829 0.0136753
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0459891 0.00976893 0.256049

CAGE analysis