Hb_010288_030

Information

Type -
Description -
Location Contig10288: 29664-32258
Sequence    

Annotation

kegg
ID pop:POPTR_0002s19840g
description POPTRDRAFT_552515; DNAJ heat shock N-terminal domain-containing family protein
nr
ID XP_012082875.1
description PREDICTED: uncharacterized protein LOC105642607 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JWC3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14012 PE=4 SV=1
Gene Ontology
ID GO:0005515
description dnaj heat shock n-terminal domain-containing family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01143: 29514-32517 , PASA_asmbl_01144: 29583-32472 , PASA_asmbl_01146: 30664-31512
cDNA
(Sanger)
(ID:Location)		 017_G13.ab1: 29514-30356 , 022_B09.ab1: 29514-30320 , 023_A07.ab1: 29514-30342 , 029_J15.ab1: 30664-31512 , 039_L15.ab1: 29514-31045

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010288_030 0.0 - - PREDICTED: uncharacterized protein LOC105642607 [Jatropha curcas]
2 Hb_071674_010 0.0801940403 transcription factor TF Family: WRKY hypothetical protein POPTR_0006s10950g [Populus trichocarpa]
3 Hb_003020_190 0.0933574858 - - PREDICTED: methylsterol monooxygenase 2-2 [Jatropha curcas]
4 Hb_000352_010 0.0955272419 - - PREDICTED: nudix hydrolase 13, mitochondrial [Jatropha curcas]
5 Hb_011033_010 0.1177756663 - - ATP-binding cassette transporter, putative [Ricinus communis]
6 Hb_001755_040 0.12050161 - - PREDICTED: cyclin-A2-4-like isoform X1 [Jatropha curcas]
7 Hb_007574_020 0.1328138302 - - PREDICTED: uncharacterized protein LOC105638146 [Jatropha curcas]
8 Hb_006133_020 0.1337247893 - - PREDICTED: DNA (cytosine-5)-methyltransferase DRM2 [Jatropha curcas]
9 Hb_000349_250 0.1344214346 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g12460 [Jatropha curcas]
10 Hb_047659_010 0.1404042545 - - conserved hypothetical protein [Ricinus communis]
11 Hb_001269_060 0.1443285085 - - PREDICTED: probable receptor-like protein kinase At1g80640 isoform X1 [Jatropha curcas]
12 Hb_000061_430 0.1473438056 - - conserved hypothetical protein [Ricinus communis]
13 Hb_001140_190 0.1488120046 - - PREDICTED: A-kinase anchor protein 9 [Jatropha curcas]
14 Hb_000230_190 0.1491766104 - - PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2 isoform X1 [Jatropha curcas]
15 Hb_001862_050 0.1495195164 - - PREDICTED: lysine-rich arabinogalactan protein 18-like [Jatropha curcas]
16 Hb_019973_010 0.1501761565 - - PREDICTED: probable methyltransferase PMT18 isoform X2 [Jatropha curcas]
17 Hb_018133_070 0.1521819519 - - PREDICTED: RING-H2 finger protein ATL43 [Jatropha curcas]
18 Hb_081529_010 0.1527243145 - - unnamed protein product [Vitis vinifera]
19 Hb_000991_030 0.1532967926 - - PREDICTED: uncharacterized protein LOC105122436 [Populus euphratica]
20 Hb_136441_010 0.1556193925 - - PREDICTED: receptor-like protein kinase [Jatropha curcas]

Gene co-expression network

sample Hb_010288_030 Hb_010288_030 Hb_071674_010 Hb_071674_010 Hb_010288_030--Hb_071674_010 Hb_003020_190 Hb_003020_190 Hb_010288_030--Hb_003020_190 Hb_000352_010 Hb_000352_010 Hb_010288_030--Hb_000352_010 Hb_011033_010 Hb_011033_010 Hb_010288_030--Hb_011033_010 Hb_001755_040 Hb_001755_040 Hb_010288_030--Hb_001755_040 Hb_007574_020 Hb_007574_020 Hb_010288_030--Hb_007574_020 Hb_071674_010--Hb_003020_190 Hb_000349_250 Hb_000349_250 Hb_071674_010--Hb_000349_250 Hb_000027_160 Hb_000027_160 Hb_071674_010--Hb_000027_160 Hb_000991_030 Hb_000991_030 Hb_071674_010--Hb_000991_030 Hb_001269_060 Hb_001269_060 Hb_071674_010--Hb_001269_060 Hb_006133_020 Hb_006133_020 Hb_003020_190--Hb_006133_020 Hb_001862_050 Hb_001862_050 Hb_003020_190--Hb_001862_050 Hb_003020_190--Hb_000991_030 Hb_007943_180 Hb_007943_180 Hb_003020_190--Hb_007943_180 Hb_001680_020 Hb_001680_020 Hb_000352_010--Hb_001680_020 Hb_001140_190 Hb_001140_190 Hb_000352_010--Hb_001140_190 Hb_000352_010--Hb_071674_010 Hb_004115_010 Hb_004115_010 Hb_000352_010--Hb_004115_010 Hb_000139_040 Hb_000139_040 Hb_000352_010--Hb_000139_040 Hb_011033_010--Hb_071674_010 Hb_000061_430 Hb_000061_430 Hb_011033_010--Hb_000061_430 Hb_005890_020 Hb_005890_020 Hb_011033_010--Hb_005890_020 Hb_012055_080 Hb_012055_080 Hb_011033_010--Hb_012055_080 Hb_018133_070 Hb_018133_070 Hb_011033_010--Hb_018133_070 Hb_002232_310 Hb_002232_310 Hb_001755_040--Hb_002232_310 Hb_004109_100 Hb_004109_100 Hb_001755_040--Hb_004109_100 Hb_000936_030 Hb_000936_030 Hb_001755_040--Hb_000936_030 Hb_001755_040--Hb_007574_020 Hb_003935_090 Hb_003935_090 Hb_001755_040--Hb_003935_090 Hb_010705_040 Hb_010705_040 Hb_001755_040--Hb_010705_040 Hb_007574_020--Hb_003935_090 Hb_007574_020--Hb_004109_100 Hb_007574_020--Hb_002232_310 Hb_005568_140 Hb_005568_140 Hb_007574_020--Hb_005568_140 Hb_002243_030 Hb_002243_030 Hb_007574_020--Hb_002243_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.914525 1.87228 20.4135 8.76257 0.263014 0.265922
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.431263 0.159678 0.415099 0.294126 6.01226

CAGE analysis