Hb_136441_010

Information

Type -
Description -
Location Contig136441: 49-898
Sequence    

Annotation

kegg
ID pop:POPTR_0204s00240g
description hypothetical protein
nr
ID XP_012081232.1
description PREDICTED: receptor-like protein kinase [Jatropha curcas]
swissprot
ID Q940E8
description Leucine-rich repeat receptor-like protein FASCIATED EAR2 OS=Zea mays GN=FEA2 PE=1 SV=1
trembl
ID A0A067K1U5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16973 PE=4 SV=1
Gene Ontology
ID GO:0016491
description lrr receptor-like serine threonine-protein kinase gso1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_136441_010 0.0 - - PREDICTED: receptor-like protein kinase [Jatropha curcas]
2 Hb_002121_030 0.1328628617 - - Ribonuclease P protein subunit P38-related isoform 1 [Theobroma cacao]
3 Hb_000809_220 0.1345862148 - - PREDICTED: 3-ketodihydrosphingosine reductase [Jatropha curcas]
4 Hb_000061_430 0.1357096277 - - conserved hypothetical protein [Ricinus communis]
5 Hb_062773_010 0.1438479529 - - beta glucosidase [Manihot esculenta]
6 Hb_000139_040 0.1441335821 - - spermine synthase, putative [Ricinus communis]
7 Hb_129956_010 0.1452325977 - - PREDICTED: serine/threonine-protein kinase SAPK2 [Eucalyptus grandis]
8 Hb_001983_040 0.1464674648 - - PREDICTED: uncharacterized protein LOC105644022 [Jatropha curcas]
9 Hb_006620_030 0.1527458743 - - nitrate reductase, putative [Ricinus communis]
10 Hb_004308_030 0.1536518392 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
11 Hb_006501_080 0.154073789 - - PREDICTED: uncharacterized protein LOC105637775 [Jatropha curcas]
12 Hb_010288_030 0.1556193925 - - PREDICTED: uncharacterized protein LOC105642607 [Jatropha curcas]
13 Hb_005357_140 0.1573309714 - - Xyloglucan endotransglucosylase/hydrolase protein A precursor, putative [Ricinus communis]
14 Hb_010422_020 0.1576697161 transcription factor TF Family: zf-HD PREDICTED: zinc-finger homeodomain protein 2-like [Jatropha curcas]
15 Hb_007574_020 0.1580486632 - - PREDICTED: uncharacterized protein LOC105638146 [Jatropha curcas]
16 Hb_059429_010 0.1581401353 - - PREDICTED: root phototropism protein 2 [Jatropha curcas]
17 Hb_001680_020 0.1584649937 desease resistance Gene Name: RPW8 Disease resistance protein ADR1, putative [Ricinus communis]
18 Hb_011033_010 0.1598863667 - - ATP-binding cassette transporter, putative [Ricinus communis]
19 Hb_000349_250 0.1601079665 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g12460 [Jatropha curcas]
20 Hb_000051_150 0.1606852921 - - hypothetical protein CICLE_v10003316mg [Citrus clementina]

Gene co-expression network

sample Hb_136441_010 Hb_136441_010 Hb_002121_030 Hb_002121_030 Hb_136441_010--Hb_002121_030 Hb_000809_220 Hb_000809_220 Hb_136441_010--Hb_000809_220 Hb_000061_430 Hb_000061_430 Hb_136441_010--Hb_000061_430 Hb_062773_010 Hb_062773_010 Hb_136441_010--Hb_062773_010 Hb_000139_040 Hb_000139_040 Hb_136441_010--Hb_000139_040 Hb_129956_010 Hb_129956_010 Hb_136441_010--Hb_129956_010 Hb_001369_590 Hb_001369_590 Hb_002121_030--Hb_001369_590 Hb_000051_150 Hb_000051_150 Hb_002121_030--Hb_000051_150 Hb_002121_030--Hb_000809_220 Hb_000152_650 Hb_000152_650 Hb_002121_030--Hb_000152_650 Hb_054615_010 Hb_054615_010 Hb_002121_030--Hb_054615_010 Hb_005365_040 Hb_005365_040 Hb_002121_030--Hb_005365_040 Hb_000809_220--Hb_000051_150 Hb_004308_030 Hb_004308_030 Hb_000809_220--Hb_004308_030 Hb_001913_070 Hb_001913_070 Hb_000809_220--Hb_001913_070 Hb_001983_040 Hb_001983_040 Hb_000809_220--Hb_001983_040 Hb_010422_020 Hb_010422_020 Hb_000809_220--Hb_010422_020 Hb_011033_010 Hb_011033_010 Hb_000061_430--Hb_011033_010 Hb_005890_020 Hb_005890_020 Hb_000061_430--Hb_005890_020 Hb_001347_030 Hb_001347_030 Hb_000061_430--Hb_001347_030 Hb_019973_010 Hb_019973_010 Hb_000061_430--Hb_019973_010 Hb_010288_030 Hb_010288_030 Hb_000061_430--Hb_010288_030 Hb_062773_010--Hb_002121_030 Hb_000160_260 Hb_000160_260 Hb_062773_010--Hb_000160_260 Hb_062773_010--Hb_001369_590 Hb_062773_010--Hb_005365_040 Hb_001671_070 Hb_001671_070 Hb_062773_010--Hb_001671_070 Hb_105148_020 Hb_105148_020 Hb_062773_010--Hb_105148_020 Hb_049846_010 Hb_049846_010 Hb_000139_040--Hb_049846_010 Hb_001258_130 Hb_001258_130 Hb_000139_040--Hb_001258_130 Hb_000139_040--Hb_129956_010 Hb_023640_020 Hb_023640_020 Hb_000139_040--Hb_023640_020 Hb_000031_240 Hb_000031_240 Hb_000139_040--Hb_000031_240 Hb_005357_140 Hb_005357_140 Hb_000139_040--Hb_005357_140 Hb_023827_030 Hb_023827_030 Hb_129956_010--Hb_023827_030 Hb_129956_010--Hb_105148_020 Hb_129956_010--Hb_049846_010 Hb_006620_030 Hb_006620_030 Hb_129956_010--Hb_006620_030 Hb_000312_100 Hb_000312_100 Hb_129956_010--Hb_000312_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.107042 0.318407 2.80099 0.900325 0.0774775 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.809316

CAGE analysis