Hb_011004_050

Information

Type -
Description -
Location Contig11004: 23911-32491
Sequence    

Annotation

kegg
ID rcu:RCOM_1494510
description kif4, putative
nr
ID XP_012073348.1
description PREDICTED: kinesin-13A [Jatropha curcas]
swissprot
ID Q940B8
description Kinesin-13A OS=Arabidopsis thaliana GN=KINESIN-13A PE=1 SV=1
trembl
ID A0A067KQJ9
description Kinesin-like protein OS=Jatropha curcas GN=JCGZ_06284 PE=3 SV=1
Gene Ontology
ID GO:0005634
description kinesin motor family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_03098: 30975-32403
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011004_050 0.0 - - PREDICTED: kinesin-13A [Jatropha curcas]
2 Hb_000152_440 0.1372071603 - - PREDICTED: UDP-glucuronate 4-epimerase 3-like [Jatropha curcas]
3 Hb_005144_120 0.1376322659 - - PREDICTED: probable glucuronoxylan glucuronosyltransferase IRX7 [Jatropha curcas]
4 Hb_001579_300 0.1521787795 - - PREDICTED: probable polygalacturonase At1g80170 [Jatropha curcas]
5 Hb_000086_210 0.1550401888 - - ABC transporter family protein [Hevea brasiliensis]
6 Hb_005563_010 0.157157336 - - PREDICTED: kinesin-II 85 kDa subunit isoform X1 [Jatropha curcas]
7 Hb_005496_020 0.1608051797 - - PREDICTED: uncharacterized protein LOC105630867 [Jatropha curcas]
8 Hb_002205_140 0.1611744112 transcription factor TF Family: bZIP PREDICTED: transcription factor RF2b [Jatropha curcas]
9 Hb_002498_160 0.1626204732 - - PREDICTED: uncharacterized protein LOC105649315 [Jatropha curcas]
10 Hb_000676_020 0.1628409732 - - PREDICTED: uncharacterized protein LOC105645386 [Jatropha curcas]
11 Hb_007044_090 0.166978606 - - PREDICTED: isoprenylcysteine alpha-carbonyl methylesterase ICME isoform X2 [Jatropha curcas]
12 Hb_011828_040 0.1684125605 - - PREDICTED: uncharacterized protein LOC105642173 isoform X2 [Jatropha curcas]
13 Hb_001904_050 0.1686344487 - - alpha-tubulin 1 [Hevea brasiliensis]
14 Hb_001386_090 0.1719590718 - - PREDICTED: uncharacterized protein LOC105632529 [Jatropha curcas]
15 Hb_013405_070 0.1723872563 - - ferric-chelate reductase, putative [Ricinus communis]
16 Hb_003408_010 0.1733764544 - - fructokinase [Manihot esculenta]
17 Hb_143004_020 0.1742866356 - - PREDICTED: phosphopantothenate--cysteine ligase 2-like [Jatropha curcas]
18 Hb_000526_010 0.1745531945 - - PREDICTED: uroporphyrinogen-III C-methyltransferase [Jatropha curcas]
19 Hb_004221_030 0.1747261206 transcription factor TF Family: bHLH PREDICTED: transcription factor SPATULA-like isoform X1 [Jatropha curcas]
20 Hb_000984_220 0.1750518098 - - PREDICTED: inositol-tetrakisphosphate 1-kinase 2-like [Populus euphratica]

Gene co-expression network

sample Hb_011004_050 Hb_011004_050 Hb_000152_440 Hb_000152_440 Hb_011004_050--Hb_000152_440 Hb_005144_120 Hb_005144_120 Hb_011004_050--Hb_005144_120 Hb_001579_300 Hb_001579_300 Hb_011004_050--Hb_001579_300 Hb_000086_210 Hb_000086_210 Hb_011004_050--Hb_000086_210 Hb_005563_010 Hb_005563_010 Hb_011004_050--Hb_005563_010 Hb_005496_020 Hb_005496_020 Hb_011004_050--Hb_005496_020 Hb_000152_440--Hb_000086_210 Hb_000012_080 Hb_000012_080 Hb_000152_440--Hb_000012_080 Hb_000935_040 Hb_000935_040 Hb_000152_440--Hb_000935_040 Hb_000139_300 Hb_000139_300 Hb_000152_440--Hb_000139_300 Hb_005074_040 Hb_005074_040 Hb_000152_440--Hb_005074_040 Hb_000152_440--Hb_001579_300 Hb_005144_120--Hb_000086_210 Hb_008179_030 Hb_008179_030 Hb_005144_120--Hb_008179_030 Hb_009222_110 Hb_009222_110 Hb_005144_120--Hb_009222_110 Hb_000328_010 Hb_000328_010 Hb_005144_120--Hb_000328_010 Hb_005144_120--Hb_005563_010 Hb_004730_020 Hb_004730_020 Hb_001579_300--Hb_004730_020 Hb_005511_130 Hb_005511_130 Hb_001579_300--Hb_005511_130 Hb_000388_080 Hb_000388_080 Hb_001579_300--Hb_000388_080 Hb_006925_050 Hb_006925_050 Hb_001579_300--Hb_006925_050 Hb_000527_080 Hb_000527_080 Hb_001579_300--Hb_000527_080 Hb_000086_210--Hb_000139_300 Hb_000086_210--Hb_005074_040 Hb_000749_020 Hb_000749_020 Hb_000086_210--Hb_000749_020 Hb_000086_210--Hb_005563_010 Hb_000086_210--Hb_000935_040 Hb_001976_030 Hb_001976_030 Hb_005563_010--Hb_001976_030 Hb_000049_180 Hb_000049_180 Hb_005563_010--Hb_000049_180 Hb_001369_100 Hb_001369_100 Hb_005563_010--Hb_001369_100 Hb_005563_010--Hb_000139_300 Hb_001628_120 Hb_001628_120 Hb_005563_010--Hb_001628_120 Hb_005496_020--Hb_004730_020 Hb_000689_050 Hb_000689_050 Hb_005496_020--Hb_000689_050 Hb_005496_020--Hb_001579_300 Hb_000984_220 Hb_000984_220 Hb_005496_020--Hb_000984_220 Hb_005496_020--Hb_006925_050 Hb_005496_020--Hb_005074_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.70073 0.733547 12.5732 9.04158 0.806464 0.941399
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.39064 1.85873 2.71068 0.780185 5.21692

CAGE analysis