Hb_000453_150

Information

Type -
Description -
Location Contig453: 92603-101720
Sequence    

Annotation

kegg
ID rcu:RCOM_1394800
description CBL-interacting serine/threonine-protein kinase, putative (EC:2.7.11.17)
nr
ID XP_002532581.1
description CBL-interacting serine/threonine-protein kinase, putative [Ricinus communis]
swissprot
ID Q2V452
description CBL-interacting serine/threonine-protein kinase 3 OS=Arabidopsis thaliana GN=CIPK3 PE=1 SV=2
trembl
ID B9T2W2
description Non-specific serine/threonine protein kinase OS=Ricinus communis GN=RCOM_1394800 PE=4 SV=1
Gene Ontology
ID GO:0004674
description cbl-interacting serine threonine-protein kinase 3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_43262: 93118-93660 , PASA_asmbl_43263: 93662-101705
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000453_150 0.0 - - CBL-interacting serine/threonine-protein kinase, putative [Ricinus communis]
2 Hb_077048_010 0.1247676823 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000537_140 0.1292820912 - - lupus la ribonucleoprotein, putative [Ricinus communis]
4 Hb_000157_200 0.1499871161 - - PREDICTED: putative disease resistance protein RGA4 isoform X3 [Eucalyptus grandis]
5 Hb_009367_080 0.152100987 transcription factor TF Family: WRKY WRKY transcription factor 42 [Jatropha curcas]
6 Hb_000322_180 0.1625658122 - - recA family protein [Populus trichocarpa]
7 Hb_005260_040 0.1641667336 - - PREDICTED: uncharacterized protein LOC105633768 isoform X1 [Jatropha curcas]
8 Hb_005725_170 0.1680033692 - - PREDICTED: pre-mRNA-processing protein 40A isoform X2 [Jatropha curcas]
9 Hb_001147_110 0.1693966889 - - PREDICTED: dynamin-2A-like [Jatropha curcas]
10 Hb_028472_010 0.1724685685 - - glycosyltransferase, putative [Ricinus communis]
11 Hb_007982_050 0.172581784 - - PREDICTED: somatic embryogenesis receptor kinase 2-like [Jatropha curcas]
12 Hb_008160_030 0.1734962137 - - DNA binding protein, putative [Ricinus communis]
13 Hb_004096_070 0.1743103655 - - PREDICTED: ubiquitin receptor RAD23c-like isoform X2 [Jatropha curcas]
14 Hb_012114_080 0.1749809536 - - gamma-glutamylcysteine synthetase [Hevea brasiliensis]
15 Hb_001953_150 0.1750322184 - - PREDICTED: protein DEK isoform X2 [Jatropha curcas]
16 Hb_001486_160 0.1764865777 - - PREDICTED: uncharacterized protein At1g04910-like [Jatropha curcas]
17 Hb_000317_060 0.1765166986 - - PREDICTED: uncharacterized protein LOC105647051 [Jatropha curcas]
18 Hb_074969_010 0.1780451786 - - hypothetical protein JCGZ_23339 [Jatropha curcas]
19 Hb_001674_040 0.1792024661 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 23 [Jatropha curcas]
20 Hb_003449_070 0.1799507397 transcription factor TF Family: SNF2 DNA repair helicase rad5,16, putative [Ricinus communis]

Gene co-expression network

sample Hb_000453_150 Hb_000453_150 Hb_077048_010 Hb_077048_010 Hb_000453_150--Hb_077048_010 Hb_000537_140 Hb_000537_140 Hb_000453_150--Hb_000537_140 Hb_000157_200 Hb_000157_200 Hb_000453_150--Hb_000157_200 Hb_009367_080 Hb_009367_080 Hb_000453_150--Hb_009367_080 Hb_000322_180 Hb_000322_180 Hb_000453_150--Hb_000322_180 Hb_005260_040 Hb_005260_040 Hb_000453_150--Hb_005260_040 Hb_008160_030 Hb_008160_030 Hb_077048_010--Hb_008160_030 Hb_002675_110 Hb_002675_110 Hb_077048_010--Hb_002675_110 Hb_000352_260 Hb_000352_260 Hb_077048_010--Hb_000352_260 Hb_010417_070 Hb_010417_070 Hb_077048_010--Hb_010417_070 Hb_077048_010--Hb_000537_140 Hb_000174_150 Hb_000174_150 Hb_077048_010--Hb_000174_150 Hb_054885_020 Hb_054885_020 Hb_000537_140--Hb_054885_020 Hb_004096_070 Hb_004096_070 Hb_000537_140--Hb_004096_070 Hb_002874_090 Hb_002874_090 Hb_000537_140--Hb_002874_090 Hb_061878_010 Hb_061878_010 Hb_000537_140--Hb_061878_010 Hb_003203_020 Hb_003203_020 Hb_000157_200--Hb_003203_020 Hb_003430_060 Hb_003430_060 Hb_000157_200--Hb_003430_060 Hb_000336_270 Hb_000336_270 Hb_000157_200--Hb_000336_270 Hb_010697_040 Hb_010697_040 Hb_000157_200--Hb_010697_040 Hb_002081_120 Hb_002081_120 Hb_000157_200--Hb_002081_120 Hb_000046_070 Hb_000046_070 Hb_000157_200--Hb_000046_070 Hb_028472_010 Hb_028472_010 Hb_009367_080--Hb_028472_010 Hb_000037_220 Hb_000037_220 Hb_009367_080--Hb_000037_220 Hb_009367_080--Hb_061878_010 Hb_005563_060 Hb_005563_060 Hb_009367_080--Hb_005563_060 Hb_002375_110 Hb_002375_110 Hb_009367_080--Hb_002375_110 Hb_000256_020 Hb_000256_020 Hb_009367_080--Hb_000256_020 Hb_000322_180--Hb_002874_090 Hb_092000_010 Hb_092000_010 Hb_000322_180--Hb_092000_010 Hb_000088_050 Hb_000088_050 Hb_000322_180--Hb_000088_050 Hb_084513_010 Hb_084513_010 Hb_000322_180--Hb_084513_010 Hb_003363_080 Hb_003363_080 Hb_000322_180--Hb_003363_080 Hb_000017_230 Hb_000017_230 Hb_000322_180--Hb_000017_230 Hb_005725_170 Hb_005725_170 Hb_005260_040--Hb_005725_170 Hb_000158_130 Hb_000158_130 Hb_005260_040--Hb_000158_130 Hb_011671_230 Hb_011671_230 Hb_005260_040--Hb_011671_230 Hb_003529_130 Hb_003529_130 Hb_005260_040--Hb_003529_130 Hb_003388_100 Hb_003388_100 Hb_005260_040--Hb_003388_100 Hb_000120_620 Hb_000120_620 Hb_005260_040--Hb_000120_620
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
15.0984 11.9122 6.85553 5.21818 2.51819 11.2796
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.62285 2.85442 4.05119 11.3492 3.294

CAGE analysis