Hb_123926_010

Information

Type -
Description -
Location Contig123926: 1227-1548
Sequence    

Annotation

kegg
ID gmx:100808523
description probable glutathione peroxidase 8-like
nr
ID XP_003532714.1
description PREDICTED: probable glutathione peroxidase 8-like [Glycine max]
swissprot
ID Q8LBU2
description Probable glutathione peroxidase 8 OS=Arabidopsis thaliana GN=GPX8 PE=2 SV=1
trembl
ID I1KP95
description Glutathione peroxidase OS=Glycine max PE=3 SV=1
Gene Ontology
ID GO:0004602
description probable glutathione peroxidase 8

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_123926_010 0.0 - - PREDICTED: probable glutathione peroxidase 8-like [Glycine max]
2 Hb_000041_290 0.1851969377 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
3 Hb_001348_220 0.216602334 - - PREDICTED: defensin Ec-AMP-D2-like [Nelumbo nucifera]
4 Hb_000080_080 0.2166126424 - - -
5 Hb_001006_030 0.2177810917 - - conserved hypothetical protein [Ricinus communis]
6 Hb_002217_490 0.2187718917 - - -
7 Hb_036176_010 0.223098537 - - hypothetical protein CISIN_1g002055mg [Citrus sinensis]
8 Hb_001021_030 0.2354038918 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
9 Hb_002284_180 0.2408443577 - - PREDICTED: glucan endo-1,3-beta-glucosidase 12 [Jatropha curcas]
10 Hb_002374_060 0.2409734504 - - amino acid transporter, putative [Ricinus communis]
11 Hb_003266_060 0.241630981 - - PREDICTED: basic 7S globulin-like [Populus euphratica]
12 Hb_000676_170 0.2426503333 - - PREDICTED: bifunctional epoxide hydrolase 2 [Jatropha curcas]
13 Hb_156696_010 0.242972404 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
14 Hb_001998_260 0.2462637311 - - cytochrome P450, putative [Ricinus communis]
15 Hb_009711_040 0.2471268205 - - PREDICTED: uncharacterized protein LOC105647789 [Jatropha curcas]
16 Hb_001318_290 0.2478386373 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
17 Hb_005237_070 0.2509750589 transcription factor TF Family: HB PREDICTED: WUSCHEL-related homeobox 4-like [Populus euphratica]
18 Hb_005144_100 0.2519527086 - - Xyloglucan endotransglucosylase/hydrolase protein 2 precursor, putative [Ricinus communis]
19 Hb_000099_020 0.2537860183 desease resistance Gene Name: ABC_membrane PREDICTED: uncharacterized protein LOC103431057 [Malus domestica]
20 Hb_002461_070 0.2549924229 - - gibberellin 2-oxidase, putative [Ricinus communis]

Gene co-expression network

sample Hb_123926_010 Hb_123926_010 Hb_000041_290 Hb_000041_290 Hb_123926_010--Hb_000041_290 Hb_001348_220 Hb_001348_220 Hb_123926_010--Hb_001348_220 Hb_000080_080 Hb_000080_080 Hb_123926_010--Hb_000080_080 Hb_001006_030 Hb_001006_030 Hb_123926_010--Hb_001006_030 Hb_002217_490 Hb_002217_490 Hb_123926_010--Hb_002217_490 Hb_036176_010 Hb_036176_010 Hb_123926_010--Hb_036176_010 Hb_001369_620 Hb_001369_620 Hb_000041_290--Hb_001369_620 Hb_002597_010 Hb_002597_010 Hb_000041_290--Hb_002597_010 Hb_001959_030 Hb_001959_030 Hb_000041_290--Hb_001959_030 Hb_001021_030 Hb_001021_030 Hb_000041_290--Hb_001021_030 Hb_002016_020 Hb_002016_020 Hb_000041_290--Hb_002016_020 Hb_080147_060 Hb_080147_060 Hb_000041_290--Hb_080147_060 Hb_148817_010 Hb_148817_010 Hb_001348_220--Hb_148817_010 Hb_004875_040 Hb_004875_040 Hb_001348_220--Hb_004875_040 Hb_000099_020 Hb_000099_020 Hb_001348_220--Hb_000099_020 Hb_014115_010 Hb_014115_010 Hb_001348_220--Hb_014115_010 Hb_000761_030 Hb_000761_030 Hb_001348_220--Hb_000761_030 Hb_000521_350 Hb_000521_350 Hb_001348_220--Hb_000521_350 Hb_000080_080--Hb_002217_490 Hb_001369_140 Hb_001369_140 Hb_000080_080--Hb_001369_140 Hb_005672_030 Hb_005672_030 Hb_000080_080--Hb_005672_030 Hb_000676_130 Hb_000676_130 Hb_000080_080--Hb_000676_130 Hb_000080_080--Hb_000041_290 Hb_007403_040 Hb_007403_040 Hb_000080_080--Hb_007403_040 Hb_000069_520 Hb_000069_520 Hb_001006_030--Hb_000069_520 Hb_002374_060 Hb_002374_060 Hb_001006_030--Hb_002374_060 Hb_003967_010 Hb_003967_010 Hb_001006_030--Hb_003967_010 Hb_003266_060 Hb_003266_060 Hb_001006_030--Hb_003266_060 Hb_002289_110 Hb_002289_110 Hb_001006_030--Hb_002289_110 Hb_000676_170 Hb_000676_170 Hb_001006_030--Hb_000676_170 Hb_002217_490--Hb_005672_030 Hb_034280_010 Hb_034280_010 Hb_002217_490--Hb_034280_010 Hb_002217_490--Hb_001369_140 Hb_002217_490--Hb_000676_130 Hb_042491_010 Hb_042491_010 Hb_036176_010--Hb_042491_010 Hb_011206_050 Hb_011206_050 Hb_036176_010--Hb_011206_050 Hb_002044_110 Hb_002044_110 Hb_036176_010--Hb_002044_110 Hb_000189_070 Hb_000189_070 Hb_036176_010--Hb_000189_070 Hb_002217_210 Hb_002217_210 Hb_036176_010--Hb_002217_210 Hb_005144_100 Hb_005144_100 Hb_036176_010--Hb_005144_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 5.07006 1.95688 10.3929 0.571 1.24233
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.845152 0.965298 11.0981 0

CAGE analysis