Hb_000080_080

Information

Type -
Description -
Location Contig80: 42925-51344
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000080_080 0.0 - - -
2 Hb_002217_490 0.1186311112 - - -
3 Hb_001369_140 0.1722710823 - - conserved hypothetical protein [Ricinus communis]
4 Hb_005672_030 0.184451561 - - PREDICTED: high mobility group B protein 3-like [Jatropha curcas]
5 Hb_000676_130 0.1960434567 - - PREDICTED: peroxidase 72-like [Nelumbo nucifera]
6 Hb_000041_290 0.1979022478 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
7 Hb_007403_040 0.1990697044 - - conserved hypothetical protein [Ricinus communis]
8 Hb_034280_010 0.2040784608 - - Protein bem46, putative [Ricinus communis]
9 Hb_009780_110 0.2104404186 - - PREDICTED: protein RSI-1 [Cicer arietinum]
10 Hb_002437_010 0.2111795892 - - PREDICTED: uncharacterized protein LOC105123193 [Populus euphratica]
11 Hb_032208_050 0.214374433 - - PREDICTED: glucan endo-1,3-beta-glucosidase 4 isoform X3 [Jatropha curcas]
12 Hb_002217_040 0.2153113485 - - PREDICTED: boron transporter 1-like [Jatropha curcas]
13 Hb_123926_010 0.2166126424 - - PREDICTED: probable glutathione peroxidase 8-like [Glycine max]
14 Hb_173741_010 0.2180459154 - - PREDICTED: caffeoyl-CoA O-methyltransferase isoform X3 [Musa acuminata subsp. malaccensis]
15 Hb_001633_120 0.2180688371 - - PREDICTED: uncharacterized protein LOC105630199 [Jatropha curcas]
16 Hb_014865_010 0.2191185845 - - hypothetical protein PRUPE_ppa017366mg, partial [Prunus persica]
17 Hb_000552_060 0.219516229 - - PREDICTED: theobromine synthase 2-like isoform X3 [Jatropha curcas]
18 Hb_000749_160 0.222911966 - - calmodulin binding protein, putative [Ricinus communis]
19 Hb_009711_040 0.2238143008 - - PREDICTED: uncharacterized protein LOC105647789 [Jatropha curcas]
20 Hb_000544_130 0.2248193122 - - PREDICTED: thaumatin-like protein [Jatropha curcas]

Gene co-expression network

sample Hb_000080_080 Hb_000080_080 Hb_002217_490 Hb_002217_490 Hb_000080_080--Hb_002217_490 Hb_001369_140 Hb_001369_140 Hb_000080_080--Hb_001369_140 Hb_005672_030 Hb_005672_030 Hb_000080_080--Hb_005672_030 Hb_000676_130 Hb_000676_130 Hb_000080_080--Hb_000676_130 Hb_000041_290 Hb_000041_290 Hb_000080_080--Hb_000041_290 Hb_007403_040 Hb_007403_040 Hb_000080_080--Hb_007403_040 Hb_002217_490--Hb_005672_030 Hb_123926_010 Hb_123926_010 Hb_002217_490--Hb_123926_010 Hb_034280_010 Hb_034280_010 Hb_002217_490--Hb_034280_010 Hb_002217_490--Hb_001369_140 Hb_002217_490--Hb_000676_130 Hb_064122_010 Hb_064122_010 Hb_001369_140--Hb_064122_010 Hb_000380_210 Hb_000380_210 Hb_001369_140--Hb_000380_210 Hb_032225_030 Hb_032225_030 Hb_001369_140--Hb_032225_030 Hb_009780_110 Hb_009780_110 Hb_001369_140--Hb_009780_110 Hb_002597_010 Hb_002597_010 Hb_001369_140--Hb_002597_010 Hb_000975_130 Hb_000975_130 Hb_005672_030--Hb_000975_130 Hb_003811_050 Hb_003811_050 Hb_005672_030--Hb_003811_050 Hb_000956_060 Hb_000956_060 Hb_005672_030--Hb_000956_060 Hb_005672_030--Hb_000676_130 Hb_002580_020 Hb_002580_020 Hb_005672_030--Hb_002580_020 Hb_000853_010 Hb_000853_010 Hb_005672_030--Hb_000853_010 Hb_014865_010 Hb_014865_010 Hb_000676_130--Hb_014865_010 Hb_000676_130--Hb_000956_060 Hb_000676_130--Hb_003811_050 Hb_000676_130--Hb_002580_020 Hb_000676_130--Hb_000975_130 Hb_001369_620 Hb_001369_620 Hb_000041_290--Hb_001369_620 Hb_000041_290--Hb_002597_010 Hb_001959_030 Hb_001959_030 Hb_000041_290--Hb_001959_030 Hb_001021_030 Hb_001021_030 Hb_000041_290--Hb_001021_030 Hb_002016_020 Hb_002016_020 Hb_000041_290--Hb_002016_020 Hb_080147_060 Hb_080147_060 Hb_000041_290--Hb_080147_060 Hb_000836_250 Hb_000836_250 Hb_007403_040--Hb_000836_250 Hb_004122_030 Hb_004122_030 Hb_007403_040--Hb_004122_030 Hb_129637_010 Hb_129637_010 Hb_007403_040--Hb_129637_010 Hb_027634_010 Hb_027634_010 Hb_007403_040--Hb_027634_010 Hb_000993_020 Hb_000993_020 Hb_007403_040--Hb_000993_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0295043 0.141879 0.279532 0.911102 0.0414513 0.0647171
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0793686 0 0.877306 0

CAGE analysis