Hb_000041_290

Information

Type -
Description -
Location Contig41: 404535-405956
Sequence    

Annotation

kegg
ID rcu:RCOM_1454130
description Aspartic proteinase nepenthesin-1 precursor, putative
nr
ID XP_002513132.1
description Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
swissprot
ID Q9LHE3
description Protein ASPARTIC PROTEASE IN GUARD CELL 2 OS=Arabidopsis thaliana GN=ASPG2 PE=2 SV=1
trembl
ID B9RGI0
description Aspartic proteinase nepenthesin-1, putative OS=Ricinus communis GN=RCOM_1454130 PE=4 SV=1
Gene Ontology
ID GO:0004190
description protein aspartic protease in guard cell 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000041_290 0.0 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
2 Hb_001369_620 0.1292530847 - - PREDICTED: protein EXORDIUM-like 3 [Jatropha curcas]
3 Hb_002597_010 0.1415982959 - - PREDICTED: putative disease resistance protein RGA1 [Malus domestica]
4 Hb_001959_030 0.1499234987 - - conserved hypothetical protein [Ricinus communis]
5 Hb_001021_030 0.1536429252 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
6 Hb_002016_020 0.1555785249 - - RALFL33, putative [Ricinus communis]
7 Hb_080147_060 0.1598651913 - - PREDICTED: cyclin-dependent kinase F-1 isoform X1 [Jatropha curcas]
8 Hb_000003_510 0.1618480069 - - PREDICTED: uncharacterized protein LOC105631555 [Jatropha curcas]
9 Hb_005489_120 0.1737394646 - - leucine rich repeat receptor kinase, putative [Ricinus communis]
10 Hb_001963_020 0.1743563745 desease resistance Gene Name: NB-ARC conserved hypothetical protein [Ricinus communis]
11 Hb_005237_070 0.1759683376 transcription factor TF Family: HB PREDICTED: WUSCHEL-related homeobox 4-like [Populus euphratica]
12 Hb_000032_560 0.1779366995 - - hypothetical protein JCGZ_15037 [Jatropha curcas]
13 Hb_025254_020 0.179374206 - - PREDICTED: formate dehydrogenase, mitochondrial [Vitis vinifera]
14 Hb_010174_170 0.1797886352 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720 isoform X1 [Jatropha curcas]
15 Hb_004122_030 0.1823881217 transcription factor TF Family: HB PREDICTED: WUSCHEL-related homeobox 4-like [Populus euphratica]
16 Hb_000005_230 0.1827158641 - - hypothetical protein POPTR_0009s01160g [Populus trichocarpa]
17 Hb_001623_400 0.1827421693 - - conserved hypothetical protein [Ricinus communis]
18 Hb_001454_410 0.1827708204 - - PREDICTED: uncharacterized protein LOC105643453 [Jatropha curcas]
19 Hb_000915_070 0.183149273 - - ATP binding protein, putative [Ricinus communis]
20 Hb_111147_010 0.1831703113 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000041_290 Hb_000041_290 Hb_001369_620 Hb_001369_620 Hb_000041_290--Hb_001369_620 Hb_002597_010 Hb_002597_010 Hb_000041_290--Hb_002597_010 Hb_001959_030 Hb_001959_030 Hb_000041_290--Hb_001959_030 Hb_001021_030 Hb_001021_030 Hb_000041_290--Hb_001021_030 Hb_002016_020 Hb_002016_020 Hb_000041_290--Hb_002016_020 Hb_080147_060 Hb_080147_060 Hb_000041_290--Hb_080147_060 Hb_000003_510 Hb_000003_510 Hb_001369_620--Hb_000003_510 Hb_001053_110 Hb_001053_110 Hb_001369_620--Hb_001053_110 Hb_001369_620--Hb_002016_020 Hb_003734_120 Hb_003734_120 Hb_001369_620--Hb_003734_120 Hb_003805_080 Hb_003805_080 Hb_001369_620--Hb_003805_080 Hb_001963_020 Hb_001963_020 Hb_001369_620--Hb_001963_020 Hb_000032_560 Hb_000032_560 Hb_002597_010--Hb_000032_560 Hb_000005_230 Hb_000005_230 Hb_002597_010--Hb_000005_230 Hb_002597_010--Hb_002016_020 Hb_002597_010--Hb_080147_060 Hb_000347_230 Hb_000347_230 Hb_002597_010--Hb_000347_230 Hb_018133_110 Hb_018133_110 Hb_002597_010--Hb_018133_110 Hb_002042_200 Hb_002042_200 Hb_001959_030--Hb_002042_200 Hb_025254_020 Hb_025254_020 Hb_001959_030--Hb_025254_020 Hb_001959_030--Hb_002016_020 Hb_001959_030--Hb_018133_110 Hb_001959_030--Hb_001369_620 Hb_000175_480 Hb_000175_480 Hb_001959_030--Hb_000175_480 Hb_002928_120 Hb_002928_120 Hb_001021_030--Hb_002928_120 Hb_003576_050 Hb_003576_050 Hb_001021_030--Hb_003576_050 Hb_004316_030 Hb_004316_030 Hb_001021_030--Hb_004316_030 Hb_029977_010 Hb_029977_010 Hb_001021_030--Hb_029977_010 Hb_009823_010 Hb_009823_010 Hb_001021_030--Hb_009823_010 Hb_135811_040 Hb_135811_040 Hb_002016_020--Hb_135811_040 Hb_002016_020--Hb_000032_560 Hb_000580_070 Hb_000580_070 Hb_002016_020--Hb_000580_070 Hb_080147_060--Hb_000003_510 Hb_080147_060--Hb_002016_020 Hb_080147_060--Hb_000580_070 Hb_080147_060--Hb_001959_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.149287 2.28432 1.66918 4.59741 0.378072 0.286107
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0332176 0.235192 0.146981 8.16325 0.272721

CAGE analysis