Hb_007403_040

Information

Type -
Description -
Location Contig7403: 42692-42997
Sequence    

Annotation

kegg
ID rcu:RCOM_0516620
description hypothetical protein
nr
ID XP_002528729.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SRW0
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0516620 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007403_040 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000836_250 0.1841521079 - - hypothetical protein VITISV_022299 [Vitis vinifera]
3 Hb_004122_030 0.189754928 transcription factor TF Family: HB PREDICTED: WUSCHEL-related homeobox 4-like [Populus euphratica]
4 Hb_129637_010 0.1902514466 - - PREDICTED: alpha-mannosidase isoform X1 [Populus euphratica]
5 Hb_027634_010 0.1960519671 - - protein binding protein, putative [Ricinus communis]
6 Hb_000080_080 0.1990697044 - - -
7 Hb_000993_020 0.2042090596 - - PREDICTED: indole-3-pyruvate monooxygenase YUCCA6 [Jatropha curcas]
8 Hb_003266_060 0.205592014 - - PREDICTED: basic 7S globulin-like [Populus euphratica]
9 Hb_001623_400 0.206665665 - - conserved hypothetical protein [Ricinus communis]
10 Hb_007545_140 0.2092093205 transcription factor TF Family: MYB PREDICTED: uncharacterized protein LOC105141503 [Populus euphratica]
11 Hb_000041_290 0.2121428996 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
12 Hb_000347_230 0.2136104814 - - inter-alpha-trypsin inhibitor heavy chain, putative [Ricinus communis]
13 Hb_001369_620 0.2157179727 - - PREDICTED: protein EXORDIUM-like 3 [Jatropha curcas]
14 Hb_000417_350 0.2157262707 - - conserved hypothetical protein [Ricinus communis]
15 Hb_009711_040 0.217375168 - - PREDICTED: uncharacterized protein LOC105647789 [Jatropha curcas]
16 Hb_001633_120 0.2176482371 - - PREDICTED: uncharacterized protein LOC105630199 [Jatropha curcas]
17 Hb_002042_200 0.2193711491 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
18 Hb_001369_140 0.2196379391 - - conserved hypothetical protein [Ricinus communis]
19 Hb_003967_010 0.2207199754 - - cytochrome P450, putative [Ricinus communis]
20 Hb_000099_020 0.2227114844 desease resistance Gene Name: ABC_membrane PREDICTED: uncharacterized protein LOC103431057 [Malus domestica]

Gene co-expression network

sample Hb_007403_040 Hb_007403_040 Hb_000836_250 Hb_000836_250 Hb_007403_040--Hb_000836_250 Hb_004122_030 Hb_004122_030 Hb_007403_040--Hb_004122_030 Hb_129637_010 Hb_129637_010 Hb_007403_040--Hb_129637_010 Hb_027634_010 Hb_027634_010 Hb_007403_040--Hb_027634_010 Hb_000080_080 Hb_000080_080 Hb_007403_040--Hb_000080_080 Hb_000993_020 Hb_000993_020 Hb_007403_040--Hb_000993_020 Hb_020805_110 Hb_020805_110 Hb_000836_250--Hb_020805_110 Hb_000306_050 Hb_000306_050 Hb_000836_250--Hb_000306_050 Hb_000297_220 Hb_000297_220 Hb_000836_250--Hb_000297_220 Hb_000836_250--Hb_129637_010 Hb_000417_350 Hb_000417_350 Hb_000836_250--Hb_000417_350 Hb_009711_040 Hb_009711_040 Hb_000836_250--Hb_009711_040 Hb_002042_200 Hb_002042_200 Hb_004122_030--Hb_002042_200 Hb_000099_020 Hb_000099_020 Hb_004122_030--Hb_000099_020 Hb_004122_030--Hb_027634_010 Hb_001959_030 Hb_001959_030 Hb_004122_030--Hb_001959_030 Hb_001369_620 Hb_001369_620 Hb_004122_030--Hb_001369_620 Hb_005237_070 Hb_005237_070 Hb_004122_030--Hb_005237_070 Hb_129637_010--Hb_000417_350 Hb_001053_110 Hb_001053_110 Hb_129637_010--Hb_001053_110 Hb_129637_010--Hb_009711_040 Hb_129637_010--Hb_001369_620 Hb_005333_120 Hb_005333_120 Hb_129637_010--Hb_005333_120 Hb_118707_020 Hb_118707_020 Hb_129637_010--Hb_118707_020 Hb_000175_480 Hb_000175_480 Hb_027634_010--Hb_000175_480 Hb_027634_010--Hb_002042_200 Hb_001623_400 Hb_001623_400 Hb_027634_010--Hb_001623_400 Hb_018133_110 Hb_018133_110 Hb_027634_010--Hb_018133_110 Hb_027634_010--Hb_001959_030 Hb_002217_490 Hb_002217_490 Hb_000080_080--Hb_002217_490 Hb_001369_140 Hb_001369_140 Hb_000080_080--Hb_001369_140 Hb_005672_030 Hb_005672_030 Hb_000080_080--Hb_005672_030 Hb_000676_130 Hb_000676_130 Hb_000080_080--Hb_000676_130 Hb_000041_290 Hb_000041_290 Hb_000080_080--Hb_000041_290 Hb_003768_110 Hb_003768_110 Hb_000993_020--Hb_003768_110 Hb_014865_010 Hb_014865_010 Hb_000993_020--Hb_014865_010 Hb_000993_020--Hb_001623_400 Hb_002437_010 Hb_002437_010 Hb_000993_020--Hb_002437_010 Hb_000979_080 Hb_000979_080 Hb_000993_020--Hb_000979_080 Hb_000993_020--Hb_000417_350
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.354354 0.896646 0.769785 2.51286 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.280493 0 3.63391 0

CAGE analysis