Hb_037711_010

Information

Type -
Description -
Location Contig37711: 5209-7174
Sequence    

Annotation

kegg
ID rcu:RCOM_1113060
description leucine-rich repeat receptor protein kinase exs precursor, putative (EC:1.3.1.74)
nr
ID XP_002531725.1
description leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
swissprot
ID C0LGQ5
description LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1
trembl
ID B9T0F6
description Leucine-rich repeat receptor protein kinase exs, putative OS=Ricinus communis GN=RCOM_1113060 PE=4 SV=1
Gene Ontology
ID GO:0005515
description serine-threonine protein plant-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_037711_010 0.0 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
2 Hb_000926_070 0.1385182493 - - conserved hypothetical protein [Ricinus communis]
3 Hb_007253_030 0.1460319382 - - PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Populus euphratica]
4 Hb_006277_080 0.1507396159 - - PREDICTED: uncharacterized protein LOC105649701 [Jatropha curcas]
5 Hb_001508_030 0.1550700823 - - hypothetical protein VITISV_029808 [Vitis vinifera]
6 Hb_019863_050 0.1609922589 - - PREDICTED: uncharacterized protein LOC103343426 [Prunus mume]
7 Hb_000072_240 0.1624933832 transcription factor TF Family: C2C2-CO-like zinc finger protein, putative [Ricinus communis]
8 Hb_000697_020 0.1667144696 - - Zinc-binding dehydrogenase family protein isoform 1 [Theobroma cacao]
9 Hb_001777_030 0.1670377815 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
10 Hb_002276_030 0.1690529339 - - PREDICTED: putative U-box domain-containing protein 42 [Jatropha curcas]
11 Hb_046739_010 0.1709805243 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X1 [Jatropha curcas]
12 Hb_011028_030 0.1730571551 - - conserved hypothetical protein [Ricinus communis]
13 Hb_002155_020 0.1750715197 - - PREDICTED: probable WRKY transcription factor 65 [Jatropha curcas]
14 Hb_008878_020 0.1763963195 - - PREDICTED: aldehyde dehydrogenase family 3 member H1-like [Populus euphratica]
15 Hb_003643_080 0.1767377582 - - hypothetical protein JCGZ_01308 [Jatropha curcas]
16 Hb_004109_270 0.1772490464 transcription factor TF Family: NAC transcription activator NAC1 family protein [Populus trichocarpa]
17 Hb_000574_320 0.1782644835 - - hypothetical protein CICLE_v10024937mg [Citrus clementina]
18 Hb_000917_200 0.1784006248 - - hypothetical protein PRUPE_ppa010555mg [Prunus persica]
19 Hb_140389_010 0.179324332 - - Ran GTPase binding protein, putative [Ricinus communis]
20 Hb_006106_010 0.1793568135 transcription factor TF Family: TCP transcription factor, putative [Ricinus communis]

Gene co-expression network

sample Hb_037711_010 Hb_037711_010 Hb_000926_070 Hb_000926_070 Hb_037711_010--Hb_000926_070 Hb_007253_030 Hb_007253_030 Hb_037711_010--Hb_007253_030 Hb_006277_080 Hb_006277_080 Hb_037711_010--Hb_006277_080 Hb_001508_030 Hb_001508_030 Hb_037711_010--Hb_001508_030 Hb_019863_050 Hb_019863_050 Hb_037711_010--Hb_019863_050 Hb_000072_240 Hb_000072_240 Hb_037711_010--Hb_000072_240 Hb_000926_070--Hb_006277_080 Hb_006478_050 Hb_006478_050 Hb_000926_070--Hb_006478_050 Hb_000917_200 Hb_000917_200 Hb_000926_070--Hb_000917_200 Hb_000103_230 Hb_000103_230 Hb_000926_070--Hb_000103_230 Hb_000926_070--Hb_019863_050 Hb_002799_060 Hb_002799_060 Hb_007253_030--Hb_002799_060 Hb_001257_110 Hb_001257_110 Hb_007253_030--Hb_001257_110 Hb_000227_260 Hb_000227_260 Hb_007253_030--Hb_000227_260 Hb_001691_170 Hb_001691_170 Hb_007253_030--Hb_001691_170 Hb_005977_040 Hb_005977_040 Hb_007253_030--Hb_005977_040 Hb_003299_060 Hb_003299_060 Hb_007253_030--Hb_003299_060 Hb_000853_050 Hb_000853_050 Hb_006277_080--Hb_000853_050 Hb_140389_010 Hb_140389_010 Hb_006277_080--Hb_140389_010 Hb_002276_030 Hb_002276_030 Hb_006277_080--Hb_002276_030 Hb_003602_030 Hb_003602_030 Hb_006277_080--Hb_003602_030 Hb_003141_060 Hb_003141_060 Hb_006277_080--Hb_003141_060 Hb_008878_020 Hb_008878_020 Hb_001508_030--Hb_008878_020 Hb_000049_170 Hb_000049_170 Hb_001508_030--Hb_000049_170 Hb_171168_010 Hb_171168_010 Hb_001508_030--Hb_171168_010 Hb_016687_010 Hb_016687_010 Hb_001508_030--Hb_016687_010 Hb_000968_010 Hb_000968_010 Hb_001508_030--Hb_000968_010 Hb_000042_310 Hb_000042_310 Hb_001508_030--Hb_000042_310 Hb_011028_030 Hb_011028_030 Hb_019863_050--Hb_011028_030 Hb_033363_030 Hb_033363_030 Hb_019863_050--Hb_033363_030 Hb_002211_020 Hb_002211_020 Hb_019863_050--Hb_002211_020 Hb_019863_050--Hb_000072_240 Hb_046739_010 Hb_046739_010 Hb_019863_050--Hb_046739_010 Hb_000031_320 Hb_000031_320 Hb_019863_050--Hb_000031_320 Hb_000594_150 Hb_000594_150 Hb_000072_240--Hb_000594_150 Hb_004976_080 Hb_004976_080 Hb_000072_240--Hb_004976_080 Hb_010180_050 Hb_010180_050 Hb_000072_240--Hb_010180_050 Hb_003126_010 Hb_003126_010 Hb_000072_240--Hb_003126_010 Hb_000072_240--Hb_002211_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0126406 0.129812 0.202012 0.0574843 0 0.0250353
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0270865 0.332509

CAGE analysis