Hb_002799_060

Information

Type -
Description -
Location Contig2799: 83144-85575
Sequence    

Annotation

kegg
ID pxb:103946619
description zeaxanthin epoxidase, chloroplastic-like
nr
ID XP_012081816.1
description PREDICTED: zeaxanthin epoxidase, chloroplastic-like [Jatropha curcas]
swissprot
ID A6T923
description FAD-dependent urate hydroxylase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=hpxO PE=1 SV=1
trembl
ID A0A067K3S0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18850 PE=4 SV=1
Gene Ontology
ID GO:0016491
description zeaxanthin chloroplastic-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_29150: 83054-85528
cDNA
(Sanger)
(ID:Location)		 047_G24.ab1: 84321-85520

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002799_060 0.0 - - PREDICTED: zeaxanthin epoxidase, chloroplastic-like [Jatropha curcas]
2 Hb_001257_110 0.0988696612 - - PREDICTED: uncharacterized protein LOC105636396 [Jatropha curcas]
3 Hb_007253_030 0.1125090864 - - PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Populus euphratica]
4 Hb_000334_010 0.1128775449 - - Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
5 Hb_001775_100 0.1297175795 - - PREDICTED: probable 2-carboxy-D-arabinitol-1-phosphatase [Jatropha curcas]
6 Hb_001604_100 0.1367088606 - - PREDICTED: putative serine/threonine-protein kinase isoform X3 [Jatropha curcas]
7 Hb_031069_040 0.1418899971 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
8 Hb_000116_090 0.1437562156 - - catalase [Hevea brasiliensis]
9 Hb_003299_060 0.14391193 - - nitrate transporter, putative [Ricinus communis]
10 Hb_000668_180 0.1463683149 - - hypothetical protein POPTR_0005s16490g [Populus trichocarpa]
11 Hb_000307_150 0.1481015361 - - PREDICTED: thioredoxin-like protein CDSP32, chloroplastic [Jatropha curcas]
12 Hb_005063_060 0.1549308274 transcription factor TF Family: GNAT PREDICTED: uncharacterized protein LOC105647704 [Jatropha curcas]
13 Hb_000027_110 0.1566982173 - - wall-associated kinase, putative [Ricinus communis]
14 Hb_000373_160 0.1578309369 - - PREDICTED: fructose-1,6-bisphosphatase, cytosolic [Jatropha curcas]
15 Hb_010402_040 0.1590280697 - - hypothetical protein JCGZ_21227 [Jatropha curcas]
16 Hb_003602_030 0.1597117628 - - PREDICTED: putative pentatricopeptide repeat-containing protein At5g52630 [Jatropha curcas]
17 Hb_186844_010 0.1610506489 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
18 Hb_119600_030 0.1611572876 - - PREDICTED: uncharacterized protein LOC105635187 [Jatropha curcas]
19 Hb_003905_030 0.1622857596 - - PREDICTED: clustered mitochondria protein homolog [Jatropha curcas]
20 Hb_005977_040 0.1631834004 - - Photosystem I reaction center subunit IV A [Medicago truncatula]

Gene co-expression network

sample Hb_002799_060 Hb_002799_060 Hb_001257_110 Hb_001257_110 Hb_002799_060--Hb_001257_110 Hb_007253_030 Hb_007253_030 Hb_002799_060--Hb_007253_030 Hb_000334_010 Hb_000334_010 Hb_002799_060--Hb_000334_010 Hb_001775_100 Hb_001775_100 Hb_002799_060--Hb_001775_100 Hb_001604_100 Hb_001604_100 Hb_002799_060--Hb_001604_100 Hb_031069_040 Hb_031069_040 Hb_002799_060--Hb_031069_040 Hb_001257_110--Hb_001775_100 Hb_005063_060 Hb_005063_060 Hb_001257_110--Hb_005063_060 Hb_074548_010 Hb_074548_010 Hb_001257_110--Hb_074548_010 Hb_005523_040 Hb_005523_040 Hb_001257_110--Hb_005523_040 Hb_003905_030 Hb_003905_030 Hb_001257_110--Hb_003905_030 Hb_007253_030--Hb_001257_110 Hb_000227_260 Hb_000227_260 Hb_007253_030--Hb_000227_260 Hb_001691_170 Hb_001691_170 Hb_007253_030--Hb_001691_170 Hb_005977_040 Hb_005977_040 Hb_007253_030--Hb_005977_040 Hb_003299_060 Hb_003299_060 Hb_007253_030--Hb_003299_060 Hb_000307_150 Hb_000307_150 Hb_000334_010--Hb_000307_150 Hb_000116_090 Hb_000116_090 Hb_000334_010--Hb_000116_090 Hb_000334_010--Hb_031069_040 Hb_000334_010--Hb_003299_060 Hb_000334_010--Hb_001604_100 Hb_001775_100--Hb_005063_060 Hb_001584_210 Hb_001584_210 Hb_001775_100--Hb_001584_210 Hb_119600_030 Hb_119600_030 Hb_001775_100--Hb_119600_030 Hb_010080_070 Hb_010080_070 Hb_001775_100--Hb_010080_070 Hb_001775_100--Hb_003905_030 Hb_001604_100--Hb_000116_090 Hb_001604_100--Hb_000307_150 Hb_001892_080 Hb_001892_080 Hb_001604_100--Hb_001892_080 Hb_002871_180 Hb_002871_180 Hb_001604_100--Hb_002871_180 Hb_007477_060 Hb_007477_060 Hb_001604_100--Hb_007477_060 Hb_000373_160 Hb_000373_160 Hb_031069_040--Hb_000373_160 Hb_001269_030 Hb_001269_030 Hb_031069_040--Hb_001269_030 Hb_031069_040--Hb_000116_090 Hb_005337_140 Hb_005337_140 Hb_031069_040--Hb_005337_140 Hb_000668_180 Hb_000668_180 Hb_031069_040--Hb_000668_180 Hb_031069_040--Hb_000307_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.369241 12.1979 20.2534 5.60438 1.18497 0.81445
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.198495 0.182184 0.0976031 0.187128 56.2326

CAGE analysis