Hb_034585_010

Information

Type -
Description -
Location Contig34585: 7849-10689
Sequence    

Annotation

kegg
ID rcu:RCOM_0603310
description molybdopterin cofactor sulfurase, putative
nr
ID XP_012079142.1
description PREDICTED: uncharacterized protein LOC105639637 [Jatropha curcas]
swissprot
ID Q8LGM7
description Molybdenum cofactor sulfurase OS=Solanum lycopersicum GN=FLACCA PE=2 SV=1
trembl
ID A0A067K6X0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12313 PE=4 SV=1
Gene Ontology
ID GO:0016740
description molybdopterin cofactor

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_36083: 8683-8827 , PASA_asmbl_36084: 10563-11460
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_034585_010 0.0 - - PREDICTED: uncharacterized protein LOC105639637 [Jatropha curcas]
2 Hb_000291_150 0.0805819562 - - PREDICTED: serine hydroxymethyltransferase 7 [Jatropha curcas]
3 Hb_002289_060 0.0890177981 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000465_280 0.0963259966 - - PREDICTED: pentatricopeptide repeat-containing protein At5g47360 [Jatropha curcas]
5 Hb_001329_250 0.1051528908 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC105642692 isoform X1 [Jatropha curcas]
6 Hb_001279_040 0.1054968508 - - PREDICTED: probable carboxylesterase 11 [Jatropha curcas]
7 Hb_001029_040 0.1057126993 - - PREDICTED: uncharacterized protein LOC105641058 [Jatropha curcas]
8 Hb_138585_080 0.1070679144 - - PREDICTED: uncharacterized protein LOC105648741 [Jatropha curcas]
9 Hb_001876_040 0.1086794728 - - PREDICTED: mucin-5B [Jatropha curcas]
10 Hb_009296_080 0.1125438095 - - PREDICTED: probable apyrase 7 isoform X1 [Jatropha curcas]
11 Hb_022250_010 0.1127327606 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX10L [Jatropha curcas]
12 Hb_000193_330 0.1130059686 - - PREDICTED: formin-like protein 20 [Jatropha curcas]
13 Hb_022092_030 0.1162334205 - - PREDICTED: lipoyl synthase, mitochondrial [Jatropha curcas]
14 Hb_003125_220 0.1184873755 - - PREDICTED: CBS domain-containing protein CBSCBSPB1 [Jatropha curcas]
15 Hb_000261_050 0.1195159615 - - PREDICTED: probable magnesium transporter NIPA2 [Populus euphratica]
16 Hb_003125_170 0.1197854076 - - PREDICTED: uncharacterized protein LOC105648791 [Jatropha curcas]
17 Hb_001369_710 0.1206754736 - - PREDICTED: uncharacterized protein LOC105648579 isoform X1 [Jatropha curcas]
18 Hb_004137_020 0.1209528796 - - PREDICTED: putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3 isoform X2 [Jatropha curcas]
19 Hb_003746_010 0.1231527284 - - conserved hypothetical protein [Ricinus communis]
20 Hb_032202_040 0.1237130684 - - PREDICTED: phospholipase D beta 2 [Jatropha curcas]

Gene co-expression network

sample Hb_034585_010 Hb_034585_010 Hb_000291_150 Hb_000291_150 Hb_034585_010--Hb_000291_150 Hb_002289_060 Hb_002289_060 Hb_034585_010--Hb_002289_060 Hb_000465_280 Hb_000465_280 Hb_034585_010--Hb_000465_280 Hb_001329_250 Hb_001329_250 Hb_034585_010--Hb_001329_250 Hb_001279_040 Hb_001279_040 Hb_034585_010--Hb_001279_040 Hb_001029_040 Hb_001029_040 Hb_034585_010--Hb_001029_040 Hb_003617_020 Hb_003617_020 Hb_000291_150--Hb_003617_020 Hb_000291_150--Hb_001329_250 Hb_001440_020 Hb_001440_020 Hb_000291_150--Hb_001440_020 Hb_004725_050 Hb_004725_050 Hb_000291_150--Hb_004725_050 Hb_000291_150--Hb_002289_060 Hb_000062_540 Hb_000062_540 Hb_002289_060--Hb_000062_540 Hb_001946_180 Hb_001946_180 Hb_002289_060--Hb_001946_180 Hb_001157_230 Hb_001157_230 Hb_002289_060--Hb_001157_230 Hb_001876_040 Hb_001876_040 Hb_002289_060--Hb_001876_040 Hb_001916_090 Hb_001916_090 Hb_002289_060--Hb_001916_090 Hb_012506_040 Hb_012506_040 Hb_000465_280--Hb_012506_040 Hb_006775_130 Hb_006775_130 Hb_000465_280--Hb_006775_130 Hb_007763_070 Hb_007763_070 Hb_000465_280--Hb_007763_070 Hb_000504_180 Hb_000504_180 Hb_000465_280--Hb_000504_180 Hb_009296_080 Hb_009296_080 Hb_000465_280--Hb_009296_080 Hb_002686_090 Hb_002686_090 Hb_000465_280--Hb_002686_090 Hb_003498_080 Hb_003498_080 Hb_001329_250--Hb_003498_080 Hb_000212_420 Hb_000212_420 Hb_001329_250--Hb_000212_420 Hb_005214_140 Hb_005214_140 Hb_001329_250--Hb_005214_140 Hb_004044_050 Hb_004044_050 Hb_001329_250--Hb_004044_050 Hb_001828_170 Hb_001828_170 Hb_001329_250--Hb_001828_170 Hb_000270_190 Hb_000270_190 Hb_001329_250--Hb_000270_190 Hb_000806_030 Hb_000806_030 Hb_001279_040--Hb_000806_030 Hb_000181_340 Hb_000181_340 Hb_001279_040--Hb_000181_340 Hb_000193_330 Hb_000193_330 Hb_001279_040--Hb_000193_330 Hb_003918_030 Hb_003918_030 Hb_001279_040--Hb_003918_030 Hb_001279_040--Hb_005214_140 Hb_001563_010 Hb_001563_010 Hb_001279_040--Hb_001563_010 Hb_001627_040 Hb_001627_040 Hb_001029_040--Hb_001627_040 Hb_007545_010 Hb_007545_010 Hb_001029_040--Hb_007545_010 Hb_003746_010 Hb_003746_010 Hb_001029_040--Hb_003746_010 Hb_001029_040--Hb_001157_230 Hb_138585_080 Hb_138585_080 Hb_001029_040--Hb_138585_080 Hb_022250_010 Hb_022250_010 Hb_001029_040--Hb_022250_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.40033 5.78375 4.04408 9.04185 3.68696 3.53687
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.92403 2.2283 5.94798 2.33037 9.83417

CAGE analysis