Hb_006775_130

Information

Type -
Description -
Location Contig6775: 99504-101979
Sequence    

Annotation

kegg
ID vvi:100262300
description bidirectional sugar transporter SWEET2a
nr
ID XP_012091868.1
description PREDICTED: bidirectional sugar transporter SWEET2a-like [Jatropha curcas]
swissprot
ID Q5JJY5
description Bidirectional sugar transporter SWEET2a OS=Oryza sativa subsp. japonica GN=SWEET2A PE=2 SV=1
trembl
ID V4TQM6
description Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016510mg PE=4 SV=1
Gene Ontology
ID GO:0008643
description bidirectional sugar transporter sweet2a-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006775_130 0.0 - - PREDICTED: bidirectional sugar transporter SWEET2a-like [Jatropha curcas]
2 Hb_001712_060 0.0576975061 - - PREDICTED: proline-rich receptor-like protein kinase PERK9 [Jatropha curcas]
3 Hb_007763_070 0.0654955009 - - PREDICTED: pentatricopeptide repeat-containing protein At1g71460, chloroplastic [Jatropha curcas]
4 Hb_000465_280 0.0706262764 - - PREDICTED: pentatricopeptide repeat-containing protein At5g47360 [Jatropha curcas]
5 Hb_005736_020 0.0859613776 - - hypothetical protein POPTR_0005s20940g [Populus trichocarpa]
6 Hb_000482_190 0.086966501 - - PREDICTED: serine/threonine-protein kinase EDR1 [Jatropha curcas]
7 Hb_000504_180 0.0883882992 - - PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Jatropha curcas]
8 Hb_012506_040 0.0885104983 transcription factor TF Family: DDT PREDICTED: uncharacterized protein LOC105637346 [Jatropha curcas]
9 Hb_011249_070 0.0913605311 - - hypothetical protein POPTR_0018s12610g [Populus trichocarpa]
10 Hb_002046_160 0.0916877513 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
11 Hb_001789_110 0.092158628 - - ubiquitin-protein ligase, putative [Ricinus communis]
12 Hb_000720_050 0.0923336841 - - PREDICTED: uncharacterized protein LOC105645857 isoform X1 [Jatropha curcas]
13 Hb_000672_040 0.092810398 - - PREDICTED: ENHANCER OF AG-4 protein 2 [Jatropha curcas]
14 Hb_000186_050 0.0936757454 - - PREDICTED: uncharacterized protein LOC105649281 [Jatropha curcas]
15 Hb_005582_040 0.0942173207 - - PREDICTED: regulator of nonsense transcripts 1 homolog [Jatropha curcas]
16 Hb_009288_020 0.0954266941 - - PREDICTED: protein FRIGIDA [Jatropha curcas]
17 Hb_009296_080 0.0964615189 - - PREDICTED: probable apyrase 7 isoform X1 [Jatropha curcas]
18 Hb_001157_240 0.0967007437 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Jatropha curcas]
19 Hb_000441_090 0.0991738507 - - PREDICTED: serine/threonine-protein phosphatase 6 regulatory subunit 2 [Jatropha curcas]
20 Hb_003040_050 0.099249017 - - PREDICTED: uncharacterized protein LOC105638219 [Jatropha curcas]

Gene co-expression network

sample Hb_006775_130 Hb_006775_130 Hb_001712_060 Hb_001712_060 Hb_006775_130--Hb_001712_060 Hb_007763_070 Hb_007763_070 Hb_006775_130--Hb_007763_070 Hb_000465_280 Hb_000465_280 Hb_006775_130--Hb_000465_280 Hb_005736_020 Hb_005736_020 Hb_006775_130--Hb_005736_020 Hb_000482_190 Hb_000482_190 Hb_006775_130--Hb_000482_190 Hb_000504_180 Hb_000504_180 Hb_006775_130--Hb_000504_180 Hb_011249_070 Hb_011249_070 Hb_001712_060--Hb_011249_070 Hb_001712_060--Hb_000482_190 Hb_001712_060--Hb_007763_070 Hb_002046_160 Hb_002046_160 Hb_001712_060--Hb_002046_160 Hb_000300_270 Hb_000300_270 Hb_001712_060--Hb_000300_270 Hb_000193_330 Hb_000193_330 Hb_007763_070--Hb_000193_330 Hb_007763_070--Hb_000465_280 Hb_001789_110 Hb_001789_110 Hb_007763_070--Hb_001789_110 Hb_000538_280 Hb_000538_280 Hb_007763_070--Hb_000538_280 Hb_012506_040 Hb_012506_040 Hb_000465_280--Hb_012506_040 Hb_000465_280--Hb_000504_180 Hb_009296_080 Hb_009296_080 Hb_000465_280--Hb_009296_080 Hb_002686_090 Hb_002686_090 Hb_000465_280--Hb_002686_090 Hb_005686_090 Hb_005686_090 Hb_005736_020--Hb_005686_090 Hb_001157_240 Hb_001157_240 Hb_005736_020--Hb_001157_240 Hb_001999_290 Hb_001999_290 Hb_005736_020--Hb_001999_290 Hb_001004_060 Hb_001004_060 Hb_005736_020--Hb_001004_060 Hb_001008_120 Hb_001008_120 Hb_005736_020--Hb_001008_120 Hb_000204_120 Hb_000204_120 Hb_005736_020--Hb_000204_120 Hb_000482_190--Hb_001789_110 Hb_000441_090 Hb_000441_090 Hb_000482_190--Hb_000441_090 Hb_003517_040 Hb_003517_040 Hb_000482_190--Hb_003517_040 Hb_001936_090 Hb_001936_090 Hb_000482_190--Hb_001936_090 Hb_000258_070 Hb_000258_070 Hb_000482_190--Hb_000258_070 Hb_001716_040 Hb_001716_040 Hb_000504_180--Hb_001716_040 Hb_001975_150 Hb_001975_150 Hb_000504_180--Hb_001975_150 Hb_158530_020 Hb_158530_020 Hb_000504_180--Hb_158530_020 Hb_001951_220 Hb_001951_220 Hb_000504_180--Hb_001951_220 Hb_000504_180--Hb_009296_080 Hb_005582_040 Hb_005582_040 Hb_000504_180--Hb_005582_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.54578 3.96027 1.60104 4.1375 2.17986 2.80087
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.08913 3.25072 2.64459 2.75261 6.17558

CAGE analysis