Hb_009296_080

Information

Type -
Description -
Location Contig9296: 89544-94123
Sequence    

Annotation

kegg
ID rcu:RCOM_0430450
description adenosine diphosphatase, putative (EC:3.6.1.5)
nr
ID XP_012072645.1
description PREDICTED: probable apyrase 7 isoform X1 [Jatropha curcas]
swissprot
ID F4JSH1
description Probable apyrase 7 OS=Arabidopsis thaliana GN=APY7 PE=2 SV=1
trembl
ID A0A067KNW7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06709 PE=4 SV=1
Gene Ontology
ID GO:0016787
description probable apyrase 7

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62807: 90509-95253 , PASA_asmbl_62808: 89477-90645
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009296_080 0.0 - - PREDICTED: probable apyrase 7 isoform X1 [Jatropha curcas]
2 Hb_138585_080 0.0555899329 - - PREDICTED: uncharacterized protein LOC105648741 [Jatropha curcas]
3 Hb_004137_020 0.0749022786 - - PREDICTED: putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3 isoform X2 [Jatropha curcas]
4 Hb_000504_180 0.075046617 - - PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Jatropha curcas]
5 Hb_000465_280 0.0767036978 - - PREDICTED: pentatricopeptide repeat-containing protein At5g47360 [Jatropha curcas]
6 Hb_012114_100 0.0816848371 - - PREDICTED: probable serine/threonine-protein kinase At5g41260 [Jatropha curcas]
7 Hb_000803_320 0.0838717204 transcription factor TF Family: PHD PREDICTED: histone-lysine N-methyltransferase ATX4 [Jatropha curcas]
8 Hb_001029_040 0.0854428631 - - PREDICTED: uncharacterized protein LOC105641058 [Jatropha curcas]
9 Hb_002874_110 0.0857252673 - - PREDICTED: uncharacterized protein LOC105637451 [Jatropha curcas]
10 Hb_000409_030 0.0864418565 - - PREDICTED: uncharacterized protein LOC105642693 [Jatropha curcas]
11 Hb_001329_250 0.0867230802 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC105642692 isoform X1 [Jatropha curcas]
12 Hb_009658_030 0.0877231384 - - PREDICTED: AP-5 complex subunit beta-1 [Jatropha curcas]
13 Hb_011249_070 0.0890351301 - - hypothetical protein POPTR_0018s12610g [Populus trichocarpa]
14 Hb_002817_060 0.0899619078 - - PREDICTED: coatomer subunit alpha-1 [Jatropha curcas]
15 Hb_009288_020 0.0900476423 - - PREDICTED: protein FRIGIDA [Jatropha curcas]
16 Hb_003498_080 0.0921254753 - - PREDICTED: decapping 5-like protein isoform X2 [Jatropha curcas]
17 Hb_000237_050 0.0932675398 - - CP2 [Hevea brasiliensis]
18 Hb_012055_040 0.0934789061 - - PREDICTED: U-box domain-containing protein 4 [Jatropha curcas]
19 Hb_001712_060 0.0938364009 - - PREDICTED: proline-rich receptor-like protein kinase PERK9 [Jatropha curcas]
20 Hb_012518_070 0.0947756449 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 9 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_009296_080 Hb_009296_080 Hb_138585_080 Hb_138585_080 Hb_009296_080--Hb_138585_080 Hb_004137_020 Hb_004137_020 Hb_009296_080--Hb_004137_020 Hb_000504_180 Hb_000504_180 Hb_009296_080--Hb_000504_180 Hb_000465_280 Hb_000465_280 Hb_009296_080--Hb_000465_280 Hb_012114_100 Hb_012114_100 Hb_009296_080--Hb_012114_100 Hb_000803_320 Hb_000803_320 Hb_009296_080--Hb_000803_320 Hb_001029_040 Hb_001029_040 Hb_138585_080--Hb_001029_040 Hb_138585_080--Hb_000504_180 Hb_001946_180 Hb_001946_180 Hb_138585_080--Hb_001946_180 Hb_002874_110 Hb_002874_110 Hb_138585_080--Hb_002874_110 Hb_138585_080--Hb_000465_280 Hb_000748_030 Hb_000748_030 Hb_004137_020--Hb_000748_030 Hb_008748_030 Hb_008748_030 Hb_004137_020--Hb_008748_030 Hb_000853_200 Hb_000853_200 Hb_004137_020--Hb_000853_200 Hb_028928_010 Hb_028928_010 Hb_004137_020--Hb_028928_010 Hb_002272_030 Hb_002272_030 Hb_004137_020--Hb_002272_030 Hb_001716_040 Hb_001716_040 Hb_000504_180--Hb_001716_040 Hb_001975_150 Hb_001975_150 Hb_000504_180--Hb_001975_150 Hb_158530_020 Hb_158530_020 Hb_000504_180--Hb_158530_020 Hb_001951_220 Hb_001951_220 Hb_000504_180--Hb_001951_220 Hb_005582_040 Hb_005582_040 Hb_000504_180--Hb_005582_040 Hb_012506_040 Hb_012506_040 Hb_000465_280--Hb_012506_040 Hb_006775_130 Hb_006775_130 Hb_000465_280--Hb_006775_130 Hb_007763_070 Hb_007763_070 Hb_000465_280--Hb_007763_070 Hb_000465_280--Hb_000504_180 Hb_002686_090 Hb_002686_090 Hb_000465_280--Hb_002686_090 Hb_012518_070 Hb_012518_070 Hb_012114_100--Hb_012518_070 Hb_006452_120 Hb_006452_120 Hb_012114_100--Hb_006452_120 Hb_001440_020 Hb_001440_020 Hb_012114_100--Hb_001440_020 Hb_011249_070 Hb_011249_070 Hb_012114_100--Hb_011249_070 Hb_012055_040 Hb_012055_040 Hb_012114_100--Hb_012055_040 Hb_003498_080 Hb_003498_080 Hb_012114_100--Hb_003498_080 Hb_000803_320--Hb_002874_110 Hb_000270_390 Hb_000270_390 Hb_000803_320--Hb_000270_390 Hb_009288_020 Hb_009288_020 Hb_000803_320--Hb_009288_020 Hb_000803_320--Hb_000504_180 Hb_009178_060 Hb_009178_060 Hb_000803_320--Hb_009178_060 Hb_006663_060 Hb_006663_060 Hb_000803_320--Hb_006663_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.48182 5.24555 2.80632 7.78394 2.81404 2.77749
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.20823 3.14728 4.34244 4.19943 7.53632

CAGE analysis