Hb_028928_010

Information

Type -
Description -
Location Contig28928: 839-3009
Sequence    

Annotation

kegg
ID pxb:103945643
description putative disease resistance RPP13-like protein 1
nr
ID KDO39737.1
description hypothetical protein CISIN_1g0030132mg, partial [Citrus sinensis]
swissprot
ID P23799
description Putative adenylate cyclase regulatory protein OS=Trypanosoma brucei brucei GN=ESAG8 PE=2 SV=1
trembl
ID A0A067DL62
description Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0030132mg PE=4 SV=1
Gene Ontology
ID GO:0005515
description disease resistance rpp13-like protein 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_028928_010 0.0 - - hypothetical protein CISIN_1g0030132mg, partial [Citrus sinensis]
2 Hb_010672_020 0.0912307868 - - PREDICTED: ATP synthase gamma chain, chloroplastic-like [Jatropha curcas]
3 Hb_001817_170 0.0933353283 - - PREDICTED: AP-1 complex subunit gamma-2-like [Jatropha curcas]
4 Hb_000567_230 0.0949070254 - - PREDICTED: peroxisome biogenesis protein 7 [Jatropha curcas]
5 Hb_000705_230 0.0954846032 - - PREDICTED: serine/threonine-protein phosphatase PP1 isozyme 2 [Jatropha curcas]
6 Hb_002272_030 0.0956091939 - - PREDICTED: cation/calcium exchanger 5 [Jatropha curcas]
7 Hb_004137_020 0.0967869931 - - PREDICTED: putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3 isoform X2 [Jatropha curcas]
8 Hb_002042_050 0.0971684773 - - PREDICTED: uncharacterized protein LOC105647554 isoform X1 [Jatropha curcas]
9 Hb_005214_140 0.0971883366 - - PREDICTED: transcription factor GTE2-like [Jatropha curcas]
10 Hb_005650_010 0.0977295496 - - ATP binding protein, putative [Ricinus communis]
11 Hb_008748_030 0.0983899869 - - conserved hypothetical protein [Ricinus communis]
12 Hb_011310_110 0.0989963991 - - PREDICTED: probable sugar phosphate/phosphate translocator At5g25400 isoform X1 [Jatropha curcas]
13 Hb_003498_080 0.1018750727 - - PREDICTED: decapping 5-like protein isoform X2 [Jatropha curcas]
14 Hb_001488_020 0.1020260095 - - PREDICTED: probable mitochondrial-processing peptidase subunit beta [Jatropha curcas]
15 Hb_000347_300 0.1022756853 - - PREDICTED: cation/calcium exchanger 4-like [Jatropha curcas]
16 Hb_006824_010 0.1029494306 - - PREDICTED: origin of replication complex subunit 4 [Jatropha curcas]
17 Hb_000023_300 0.1042504846 - - Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
18 Hb_004994_180 0.1047660389 - - malic enzyme, putative [Ricinus communis]
19 Hb_172426_030 0.1051596426 - - acetylglucosaminyltransferase, putative [Ricinus communis]
20 Hb_000853_200 0.1051930367 - - PREDICTED: uncharacterized protein LOC105642574 [Jatropha curcas]

Gene co-expression network

sample Hb_028928_010 Hb_028928_010 Hb_010672_020 Hb_010672_020 Hb_028928_010--Hb_010672_020 Hb_001817_170 Hb_001817_170 Hb_028928_010--Hb_001817_170 Hb_000567_230 Hb_000567_230 Hb_028928_010--Hb_000567_230 Hb_000705_230 Hb_000705_230 Hb_028928_010--Hb_000705_230 Hb_002272_030 Hb_002272_030 Hb_028928_010--Hb_002272_030 Hb_004137_020 Hb_004137_020 Hb_028928_010--Hb_004137_020 Hb_011310_110 Hb_011310_110 Hb_010672_020--Hb_011310_110 Hb_010672_020--Hb_000705_230 Hb_000665_170 Hb_000665_170 Hb_010672_020--Hb_000665_170 Hb_000395_110 Hb_000395_110 Hb_010672_020--Hb_000395_110 Hb_007545_010 Hb_007545_010 Hb_010672_020--Hb_007545_010 Hb_006120_050 Hb_006120_050 Hb_010672_020--Hb_006120_050 Hb_003758_010 Hb_003758_010 Hb_001817_170--Hb_003758_010 Hb_006189_020 Hb_006189_020 Hb_001817_170--Hb_006189_020 Hb_002042_050 Hb_002042_050 Hb_001817_170--Hb_002042_050 Hb_003626_070 Hb_003626_070 Hb_001817_170--Hb_003626_070 Hb_002071_070 Hb_002071_070 Hb_001817_170--Hb_002071_070 Hb_000139_080 Hb_000139_080 Hb_001817_170--Hb_000139_080 Hb_000567_230--Hb_002042_050 Hb_000567_230--Hb_002272_030 Hb_000567_230--Hb_001817_170 Hb_000703_190 Hb_000703_190 Hb_000567_230--Hb_000703_190 Hb_006100_020 Hb_006100_020 Hb_000567_230--Hb_006100_020 Hb_000567_230--Hb_000139_080 Hb_000705_230--Hb_011310_110 Hb_001633_200 Hb_001633_200 Hb_000705_230--Hb_001633_200 Hb_000705_230--Hb_000703_190 Hb_000197_020 Hb_000197_020 Hb_000705_230--Hb_000197_020 Hb_000069_640 Hb_000069_640 Hb_000705_230--Hb_000069_640 Hb_020178_040 Hb_020178_040 Hb_002272_030--Hb_020178_040 Hb_002272_030--Hb_002042_050 Hb_001723_100 Hb_001723_100 Hb_002272_030--Hb_001723_100 Hb_002830_010 Hb_002830_010 Hb_002272_030--Hb_002830_010 Hb_009288_010 Hb_009288_010 Hb_002272_030--Hb_009288_010 Hb_009296_080 Hb_009296_080 Hb_004137_020--Hb_009296_080 Hb_000748_030 Hb_000748_030 Hb_004137_020--Hb_000748_030 Hb_008748_030 Hb_008748_030 Hb_004137_020--Hb_008748_030 Hb_000853_200 Hb_000853_200 Hb_004137_020--Hb_000853_200 Hb_004137_020--Hb_002272_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.55281 1.95621 1.9629 3.07674 0.726254 0.739797
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.03933 0.991112 2.00119 1.95848 2.59102

CAGE analysis