Hb_000567_230

Information

Type -
Description -
Location Contig567: 270134-271090
Sequence    

Annotation

kegg
ID pop:POPTR_0004s05630g
description POPTRDRAFT_555672; peroxisomal targeting signal type 2 receptor family protein
nr
ID XP_012091777.1
description PREDICTED: peroxisome biogenesis protein 7 [Jatropha curcas]
swissprot
ID Q9XF57
description Peroxisome biogenesis protein 7 OS=Arabidopsis thaliana GN=PEX7 PE=1 SV=2
trembl
ID A0A067JNL8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21570 PE=4 SV=1
Gene Ontology
ID GO:0080008
description peroxisome biogenesis protein 7

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_49134: 268766-269194 , PASA_asmbl_49135: 270086-271262
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000567_230 0.0 - - PREDICTED: peroxisome biogenesis protein 7 [Jatropha curcas]
2 Hb_002042_050 0.058187878 - - PREDICTED: uncharacterized protein LOC105647554 isoform X1 [Jatropha curcas]
3 Hb_002272_030 0.0620159701 - - PREDICTED: cation/calcium exchanger 5 [Jatropha curcas]
4 Hb_001817_170 0.0727422075 - - PREDICTED: AP-1 complex subunit gamma-2-like [Jatropha curcas]
5 Hb_000703_190 0.0739319234 - - PREDICTED: serine/threonine-protein kinase EDR1 isoform X1 [Jatropha curcas]
6 Hb_006100_020 0.074666011 - - PREDICTED: inactive poly [ADP-ribose] polymerase RCD1 [Jatropha curcas]
7 Hb_000139_080 0.0755009622 - - PREDICTED: vacuole membrane protein KMS1 isoform X2 [Jatropha curcas]
8 Hb_008279_040 0.0760934785 - - Rer1 family protein isoform 2 [Theobroma cacao]
9 Hb_005214_140 0.0764415923 - - PREDICTED: transcription factor GTE2-like [Jatropha curcas]
10 Hb_000304_080 0.0769840517 - - PREDICTED: probable helicase MAGATAMA 3 isoform X1 [Jatropha curcas]
11 Hb_001259_050 0.0776368168 - - calcium lipid binding protein, putative [Ricinus communis]
12 Hb_003098_070 0.0781959398 - - PREDICTED: uncharacterized protein LOC105633456 [Jatropha curcas]
13 Hb_003626_070 0.0783676689 - - PREDICTED: golgin candidate 1 [Jatropha curcas]
14 Hb_189216_010 0.0794128092 - - PREDICTED: uncharacterized protein LOC105642236 isoform X1 [Jatropha curcas]
15 Hb_020178_040 0.0795899539 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000805_100 0.0809266386 - - PREDICTED: ATP-dependent zinc metalloprotease FTSH 10, mitochondrial isoform X1 [Jatropha curcas]
17 Hb_000025_350 0.0816286063 - - PREDICTED: rho GTPase-activating protein 7 isoform X1 [Jatropha curcas]
18 Hb_000365_230 0.0816820937 - - PREDICTED: uncharacterized protein LOC105649056 [Jatropha curcas]
19 Hb_000363_290 0.0819064015 - - fimbrin, putative [Ricinus communis]
20 Hb_008748_030 0.0827005112 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000567_230 Hb_000567_230 Hb_002042_050 Hb_002042_050 Hb_000567_230--Hb_002042_050 Hb_002272_030 Hb_002272_030 Hb_000567_230--Hb_002272_030 Hb_001817_170 Hb_001817_170 Hb_000567_230--Hb_001817_170 Hb_000703_190 Hb_000703_190 Hb_000567_230--Hb_000703_190 Hb_006100_020 Hb_006100_020 Hb_000567_230--Hb_006100_020 Hb_000139_080 Hb_000139_080 Hb_000567_230--Hb_000139_080 Hb_002042_050--Hb_002272_030 Hb_020178_040 Hb_020178_040 Hb_002042_050--Hb_020178_040 Hb_000243_260 Hb_000243_260 Hb_002042_050--Hb_000243_260 Hb_002042_050--Hb_006100_020 Hb_002042_050--Hb_001817_170 Hb_002272_030--Hb_020178_040 Hb_001723_100 Hb_001723_100 Hb_002272_030--Hb_001723_100 Hb_002830_010 Hb_002830_010 Hb_002272_030--Hb_002830_010 Hb_009288_010 Hb_009288_010 Hb_002272_030--Hb_009288_010 Hb_003758_010 Hb_003758_010 Hb_001817_170--Hb_003758_010 Hb_006189_020 Hb_006189_020 Hb_001817_170--Hb_006189_020 Hb_003626_070 Hb_003626_070 Hb_001817_170--Hb_003626_070 Hb_002071_070 Hb_002071_070 Hb_001817_170--Hb_002071_070 Hb_001817_170--Hb_000139_080 Hb_000260_460 Hb_000260_460 Hb_000703_190--Hb_000260_460 Hb_000078_140 Hb_000078_140 Hb_000703_190--Hb_000078_140 Hb_000703_190--Hb_001817_170 Hb_000703_190--Hb_000139_080 Hb_000317_040 Hb_000317_040 Hb_000703_190--Hb_000317_040 Hb_159809_070 Hb_159809_070 Hb_000703_190--Hb_159809_070 Hb_033312_130 Hb_033312_130 Hb_006100_020--Hb_033312_130 Hb_001141_240 Hb_001141_240 Hb_006100_020--Hb_001141_240 Hb_048476_080 Hb_048476_080 Hb_006100_020--Hb_048476_080 Hb_001008_130 Hb_001008_130 Hb_006100_020--Hb_001008_130 Hb_000169_020 Hb_000169_020 Hb_006100_020--Hb_000169_020 Hb_003098_070 Hb_003098_070 Hb_000139_080--Hb_003098_070 Hb_033312_040 Hb_033312_040 Hb_000139_080--Hb_033312_040 Hb_000139_080--Hb_000078_140 Hb_000139_080--Hb_006189_020 Hb_000139_080--Hb_003626_070 Hb_000139_080--Hb_000169_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
15.9997 28.1427 30.7324 36.7461 15.9405 11.8314
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
15.956 24.1712 24.5744 22.5815 35.8923

CAGE analysis