Hb_000260_460

Information

Type -
Description -
Location Contig260: 286251-291608
Sequence    

Annotation

kegg
ID rcu:RCOM_1323420
description Ethanolamine-phosphate cytidylyltransferase, putative (EC:2.7.7.14)
nr
ID XP_002519980.1
description Ethanolamine-phosphate cytidylyltransferase, putative [Ricinus communis]
swissprot
ID Q9ZVI9
description Ethanolamine-phosphate cytidylyltransferase OS=Arabidopsis thaliana GN=PECT1 PE=1 SV=1
trembl
ID B9S1W1
description Ethanolamine-phosphate cytidylyltransferase, putative OS=Ricinus communis GN=RCOM_1323420 PE=4 SV=1
Gene Ontology
ID GO:0005634
description ethanolamine-phosphate cytidylyltransferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_27006: 286261-291345
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000260_460 0.0 - - Ethanolamine-phosphate cytidylyltransferase, putative [Ricinus communis]
2 Hb_000703_190 0.0614051854 - - PREDICTED: serine/threonine-protein kinase EDR1 isoform X1 [Jatropha curcas]
3 Hb_000101_080 0.069905719 - - PREDICTED: protein CREG1 [Jatropha curcas]
4 Hb_000028_520 0.0752578532 - - hypothetical protein L484_025125 [Morus notabilis]
5 Hb_000078_140 0.0764525072 - - PREDICTED: WD repeat-containing protein 11 [Jatropha curcas]
6 Hb_000317_040 0.0793548916 - - PREDICTED: xylosyltransferase 1-like [Jatropha curcas]
7 Hb_001703_040 0.0803555889 - - PREDICTED: uncharacterized protein At1g04910 isoform X2 [Jatropha curcas]
8 Hb_032202_220 0.0814262192 - - ring finger protein, putative [Ricinus communis]
9 Hb_000025_350 0.0845079086 - - PREDICTED: rho GTPase-activating protein 7 isoform X1 [Jatropha curcas]
10 Hb_089839_010 0.0858256834 - - PREDICTED: probable xyloglucan glycosyltransferase 6 [Jatropha curcas]
11 Hb_002631_240 0.0879028939 - - JHL17M24.3 [Jatropha curcas]
12 Hb_000363_290 0.0879318567 - - fimbrin, putative [Ricinus communis]
13 Hb_001014_060 0.0879757041 transcription factor TF Family: SET histone-lysine n-methyltransferase, suvh, putative [Ricinus communis]
14 Hb_001014_070 0.0883328074 - - PREDICTED: uncharacterized protein LOC105647305 [Jatropha curcas]
15 Hb_074197_040 0.0891521889 - - PREDICTED: SNARE-interacting protein KEULE [Jatropha curcas]
16 Hb_001025_120 0.0898738592 transcription factor TF Family: Jumonji PREDICTED: jmjC domain-containing protein 4 [Jatropha curcas]
17 Hb_001301_270 0.0901076122 - - PREDICTED: heat shock 70 kDa protein 16 [Jatropha curcas]
18 Hb_004100_050 0.0901255297 - - PREDICTED: mitochondrial-processing peptidase subunit alpha-like [Jatropha curcas]
19 Hb_003498_100 0.0901665506 - - component of oligomeric golgi complex, putative [Ricinus communis]
20 Hb_018790_020 0.0909790801 - - protein kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000260_460 Hb_000260_460 Hb_000703_190 Hb_000703_190 Hb_000260_460--Hb_000703_190 Hb_000101_080 Hb_000101_080 Hb_000260_460--Hb_000101_080 Hb_000028_520 Hb_000028_520 Hb_000260_460--Hb_000028_520 Hb_000078_140 Hb_000078_140 Hb_000260_460--Hb_000078_140 Hb_000317_040 Hb_000317_040 Hb_000260_460--Hb_000317_040 Hb_001703_040 Hb_001703_040 Hb_000260_460--Hb_001703_040 Hb_000703_190--Hb_000078_140 Hb_001817_170 Hb_001817_170 Hb_000703_190--Hb_001817_170 Hb_000139_080 Hb_000139_080 Hb_000703_190--Hb_000139_080 Hb_000703_190--Hb_000317_040 Hb_159809_070 Hb_159809_070 Hb_000703_190--Hb_159809_070 Hb_001512_040 Hb_001512_040 Hb_000101_080--Hb_001512_040 Hb_032202_220 Hb_032202_220 Hb_000101_080--Hb_032202_220 Hb_000101_080--Hb_000703_190 Hb_079526_040 Hb_079526_040 Hb_000101_080--Hb_079526_040 Hb_000101_080--Hb_000078_140 Hb_002157_120 Hb_002157_120 Hb_000028_520--Hb_002157_120 Hb_018790_020 Hb_018790_020 Hb_000028_520--Hb_018790_020 Hb_000061_180 Hb_000061_180 Hb_000028_520--Hb_000061_180 Hb_001025_120 Hb_001025_120 Hb_000028_520--Hb_001025_120 Hb_000058_130 Hb_000058_130 Hb_000028_520--Hb_000058_130 Hb_003119_060 Hb_003119_060 Hb_000028_520--Hb_003119_060 Hb_000078_140--Hb_000139_080 Hb_000078_140--Hb_079526_040 Hb_074197_040 Hb_074197_040 Hb_000078_140--Hb_074197_040 Hb_000078_140--Hb_032202_220 Hb_003098_070 Hb_003098_070 Hb_000078_140--Hb_003098_070 Hb_001195_400 Hb_001195_400 Hb_000078_140--Hb_001195_400 Hb_003777_200 Hb_003777_200 Hb_000317_040--Hb_003777_200 Hb_019181_040 Hb_019181_040 Hb_000317_040--Hb_019181_040 Hb_002326_040 Hb_002326_040 Hb_000317_040--Hb_002326_040 Hb_000046_500 Hb_000046_500 Hb_000317_040--Hb_000046_500 Hb_012506_030 Hb_012506_030 Hb_000317_040--Hb_012506_030 Hb_000788_030 Hb_000788_030 Hb_001703_040--Hb_000788_030 Hb_012438_030 Hb_012438_030 Hb_001703_040--Hb_012438_030 Hb_002631_240 Hb_002631_240 Hb_001703_040--Hb_002631_240 Hb_087313_010 Hb_087313_010 Hb_001703_040--Hb_087313_010 Hb_001504_010 Hb_001504_010 Hb_001703_040--Hb_001504_010 Hb_000120_890 Hb_000120_890 Hb_001703_040--Hb_000120_890
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.04724 4.83328 12.7724 10.3462 6.34919 3.82531
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.03526 5.52813 7.99261 6.30241 9.97447

CAGE analysis