Hb_031004_010

Information

Type -
Description -
Location Contig31004: 87-937
Sequence    

Annotation

kegg
ID pda:103696607
description uncharacterized LOC103696607
nr
ID XP_012073479.1
description PREDICTED: uncharacterized protein LOC105635099 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID U5CUI2
description Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s04947p00003620 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_031004_010 0.0 - - PREDICTED: uncharacterized protein LOC105635099 [Jatropha curcas]
2 Hb_009683_050 0.2627181028 - - wall-associated kinase, putative [Ricinus communis]
3 Hb_004310_010 0.2744817592 transcription factor TF Family: ERF Ethylene-responsive transcription factor, putative [Ricinus communis]
4 Hb_002215_010 0.2838092807 - - receptor protein kinase, putative [Ricinus communis]
5 Hb_000272_120 0.2909573699 transcription factor TF Family: ARR-B PREDICTED: two-component response regulator ARR18 isoform X2 [Jatropha curcas]
6 Hb_001341_110 0.291795711 - - PREDICTED: vicilin-like antimicrobial peptides 2-2 [Jatropha curcas]
7 Hb_000656_180 0.2983113769 - - PREDICTED: uncharacterized protein LOC105631371 [Jatropha curcas]
8 Hb_005400_040 0.3007278047 - - PREDICTED: uncharacterized protein At4g04775-like [Jatropha curcas]
9 Hb_006925_070 0.309984073 - - hypothetical protein JCGZ_20652 [Jatropha curcas]
10 Hb_019961_010 0.3101815761 - - hypothetical protein POPTR_0017s11350g [Populus trichocarpa]
11 Hb_002719_070 0.3102889129 - - gibberellin 20-oxidase, putative [Ricinus communis]
12 Hb_065500_040 0.3103321703 - - conserved hypothetical protein [Ricinus communis]
13 Hb_002774_090 0.3132540014 - - conserved hypothetical protein [Ricinus communis]
14 Hb_008616_060 0.3179351125 - - syntaxin, putative [Ricinus communis]
15 Hb_000032_190 0.3180633053 - - -
16 Hb_001860_010 0.3187096389 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
17 Hb_121913_010 0.3236173836 - - Disease resistance protein RPS5, putative [Ricinus communis]
18 Hb_138628_010 0.3244798486 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
19 Hb_000997_110 0.3247629564 - - PREDICTED: uncharacterized protein LOC105632092 [Jatropha curcas]
20 Hb_001377_500 0.3253198218 - - DOF AFFECTING GERMINATION 2 family protein [Populus trichocarpa]

Gene co-expression network

sample Hb_031004_010 Hb_031004_010 Hb_009683_050 Hb_009683_050 Hb_031004_010--Hb_009683_050 Hb_004310_010 Hb_004310_010 Hb_031004_010--Hb_004310_010 Hb_002215_010 Hb_002215_010 Hb_031004_010--Hb_002215_010 Hb_000272_120 Hb_000272_120 Hb_031004_010--Hb_000272_120 Hb_001341_110 Hb_001341_110 Hb_031004_010--Hb_001341_110 Hb_000656_180 Hb_000656_180 Hb_031004_010--Hb_000656_180 Hb_000086_610 Hb_000086_610 Hb_009683_050--Hb_000086_610 Hb_006538_030 Hb_006538_030 Hb_009683_050--Hb_006538_030 Hb_019654_010 Hb_019654_010 Hb_009683_050--Hb_019654_010 Hb_133845_010 Hb_133845_010 Hb_009683_050--Hb_133845_010 Hb_002660_090 Hb_002660_090 Hb_009683_050--Hb_002660_090 Hb_000322_120 Hb_000322_120 Hb_009683_050--Hb_000322_120 Hb_076223_020 Hb_076223_020 Hb_004310_010--Hb_076223_020 Hb_000155_100 Hb_000155_100 Hb_004310_010--Hb_000155_100 Hb_005686_070 Hb_005686_070 Hb_004310_010--Hb_005686_070 Hb_000523_060 Hb_000523_060 Hb_004310_010--Hb_000523_060 Hb_005545_090 Hb_005545_090 Hb_004310_010--Hb_005545_090 Hb_151281_010 Hb_151281_010 Hb_002215_010--Hb_151281_010 Hb_001481_030 Hb_001481_030 Hb_002215_010--Hb_001481_030 Hb_079955_010 Hb_079955_010 Hb_002215_010--Hb_079955_010 Hb_000333_130 Hb_000333_130 Hb_002215_010--Hb_000333_130 Hb_131591_010 Hb_131591_010 Hb_002215_010--Hb_131591_010 Hb_000676_030 Hb_000676_030 Hb_002215_010--Hb_000676_030 Hb_013818_040 Hb_013818_040 Hb_000272_120--Hb_013818_040 Hb_005539_020 Hb_005539_020 Hb_000272_120--Hb_005539_020 Hb_005400_040 Hb_005400_040 Hb_000272_120--Hb_005400_040 Hb_002631_040 Hb_002631_040 Hb_000272_120--Hb_002631_040 Hb_011716_050 Hb_011716_050 Hb_000272_120--Hb_011716_050 Hb_004899_330 Hb_004899_330 Hb_000272_120--Hb_004899_330 Hb_001277_160 Hb_001277_160 Hb_001341_110--Hb_001277_160 Hb_021888_090 Hb_021888_090 Hb_001341_110--Hb_021888_090 Hb_075230_010 Hb_075230_010 Hb_001341_110--Hb_075230_010 Hb_001277_190 Hb_001277_190 Hb_001341_110--Hb_001277_190 Hb_000086_340 Hb_000086_340 Hb_001341_110--Hb_000086_340 Hb_005000_250 Hb_005000_250 Hb_001341_110--Hb_005000_250 Hb_000656_180--Hb_009683_050 Hb_002445_130 Hb_002445_130 Hb_000656_180--Hb_002445_130 Hb_086002_010 Hb_086002_010 Hb_000656_180--Hb_086002_010 Hb_000659_020 Hb_000659_020 Hb_000656_180--Hb_000659_020 Hb_133508_010 Hb_133508_010 Hb_000656_180--Hb_133508_010 Hb_000029_410 Hb_000029_410 Hb_000656_180--Hb_000029_410
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0401027 0.312238 0.0608991 0.0420101 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0929104 0 0 0.059706 0

CAGE analysis