Hb_002215_010

Information

Type -
Description -
Location Contig2215: 8092-12370
Sequence    

Annotation

kegg
ID rcu:RCOM_1115620
description receptor protein kinase, putative (EC:2.7.10.2)
nr
ID XP_002525309.1
description receptor protein kinase, putative [Ricinus communis]
swissprot
ID A8R7E6
description Chitin elicitor receptor kinase 1 OS=Arabidopsis thaliana GN=CERK1 PE=1 SV=1
trembl
ID B9SH40
description Receptor protein kinase, putative OS=Ricinus communis GN=RCOM_1115620 PE=3 SV=1
Gene Ontology
ID GO:0000166
description chitin elicitor receptor kinase 1-like isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002215_010 0.0 - - receptor protein kinase, putative [Ricinus communis]
2 Hb_151281_010 0.1573918241 - - PREDICTED: LOW QUALITY PROTEIN: probable L-type lectin-domain containing receptor kinase S.5 [Jatropha curcas]
3 Hb_001481_030 0.158504909 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
4 Hb_079955_010 0.1644395392 transcription factor TF Family: MYB-related PREDICTED: myb-related protein Myb4-like [Populus euphratica]
5 Hb_000333_130 0.1752241177 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
6 Hb_131591_010 0.1753377409 - - PREDICTED: cytochrome P450 83B1-like [Jatropha curcas]
7 Hb_000676_030 0.1761882085 - - PREDICTED: probable mitochondrial chaperone BCS1-B [Jatropha curcas]
8 Hb_002621_030 0.181311303 - - hypothetical protein CISIN_1g006155mg [Citrus sinensis]
9 Hb_011791_010 0.1840004676 - - PREDICTED: cytochrome P450 83B1-like [Jatropha curcas]
10 Hb_003090_060 0.1860264912 - - PAR1 protein [Theobroma cacao]
11 Hb_000322_200 0.1870615034 transcription factor TF Family: bHLH PREDICTED: putative transcription factor bHLH041 [Jatropha curcas]
12 Hb_001863_100 0.1985793173 - - conserved hypothetical protein [Ricinus communis]
13 Hb_005424_070 0.1994510278 - - PREDICTED: TATA-box-binding protein 1-like [Jatropha curcas]
14 Hb_001073_060 0.2010678727 - - phosphate transporter 1 [Hevea brasiliensis]
15 Hb_000532_060 0.2045609705 - - copper-transporting atpase p-type, putative [Ricinus communis]
16 Hb_003636_010 0.2060783842 - - hypothetical protein CISIN_1g037850mg, partial [Citrus sinensis]
17 Hb_106969_010 0.2062193905 - - Cytochrome P450 76C4 [Glycine soja]
18 Hb_001691_190 0.2078016651 - - conserved hypothetical protein [Ricinus communis]
19 Hb_002219_090 0.2084783403 - - protein kinase atmrk1, putative [Ricinus communis]
20 Hb_001515_050 0.209494679 - - PREDICTED: uncharacterized protein LOC105636626 [Jatropha curcas]

Gene co-expression network

sample Hb_002215_010 Hb_002215_010 Hb_151281_010 Hb_151281_010 Hb_002215_010--Hb_151281_010 Hb_001481_030 Hb_001481_030 Hb_002215_010--Hb_001481_030 Hb_079955_010 Hb_079955_010 Hb_002215_010--Hb_079955_010 Hb_000333_130 Hb_000333_130 Hb_002215_010--Hb_000333_130 Hb_131591_010 Hb_131591_010 Hb_002215_010--Hb_131591_010 Hb_000676_030 Hb_000676_030 Hb_002215_010--Hb_000676_030 Hb_151281_010--Hb_079955_010 Hb_151281_010--Hb_131591_010 Hb_002621_030 Hb_002621_030 Hb_151281_010--Hb_002621_030 Hb_003090_060 Hb_003090_060 Hb_151281_010--Hb_003090_060 Hb_151281_010--Hb_000676_030 Hb_011791_010 Hb_011791_010 Hb_151281_010--Hb_011791_010 Hb_000720_110 Hb_000720_110 Hb_001481_030--Hb_000720_110 Hb_001424_080 Hb_001424_080 Hb_001481_030--Hb_001424_080 Hb_000223_050 Hb_000223_050 Hb_001481_030--Hb_000223_050 Hb_005306_040 Hb_005306_040 Hb_001481_030--Hb_005306_040 Hb_034342_010 Hb_034342_010 Hb_001481_030--Hb_034342_010 Hb_000512_080 Hb_000512_080 Hb_001481_030--Hb_000512_080 Hb_079955_010--Hb_003090_060 Hb_079955_010--Hb_002621_030 Hb_079955_010--Hb_131591_010 Hb_079955_010--Hb_011791_010 Hb_111985_060 Hb_111985_060 Hb_079955_010--Hb_111985_060 Hb_106969_010 Hb_106969_010 Hb_000333_130--Hb_106969_010 Hb_000333_130--Hb_011791_010 Hb_149056_010 Hb_149056_010 Hb_000333_130--Hb_149056_010 Hb_001009_110 Hb_001009_110 Hb_000333_130--Hb_001009_110 Hb_001073_060 Hb_001073_060 Hb_000333_130--Hb_001073_060 Hb_002219_090 Hb_002219_090 Hb_000333_130--Hb_002219_090 Hb_131591_010--Hb_002621_030 Hb_001691_190 Hb_001691_190 Hb_131591_010--Hb_001691_190 Hb_131591_010--Hb_000676_030 Hb_131591_010--Hb_003090_060 Hb_000676_030--Hb_011791_010 Hb_000676_030--Hb_002621_030 Hb_000676_030--Hb_001073_060 Hb_000676_030--Hb_002219_090 Hb_000676_030--Hb_079955_010 Hb_005000_200 Hb_005000_200 Hb_000676_030--Hb_005000_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.55978 0.0663099 0.0846877 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0486174 0 0 0.245845 0

CAGE analysis