Hb_011791_010

Information

Type -
Description -
Location Contig11791: 18334-20464
Sequence    

Annotation

kegg
ID rcu:RCOM_1596840
description cytochrome P450, putative (EC:1.14.13.68)
nr
ID XP_012073846.1
description PREDICTED: cytochrome P450 83B1-like [Jatropha curcas]
swissprot
ID O65782
description Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1
trembl
ID A0A067KYL3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08245 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 83b1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_05395: 18334-20501
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011791_010 0.0 - - PREDICTED: cytochrome P450 83B1-like [Jatropha curcas]
2 Hb_000676_030 0.090686715 - - PREDICTED: probable mitochondrial chaperone BCS1-B [Jatropha curcas]
3 Hb_002219_090 0.0924785844 - - protein kinase atmrk1, putative [Ricinus communis]
4 Hb_001073_060 0.0994840264 - - phosphate transporter 1 [Hevea brasiliensis]
5 Hb_079955_010 0.1058027264 transcription factor TF Family: MYB-related PREDICTED: myb-related protein Myb4-like [Populus euphratica]
6 Hb_000333_130 0.109783454 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
7 Hb_106969_010 0.1125880345 - - Cytochrome P450 76C4 [Glycine soja]
8 Hb_002621_030 0.1154734176 - - hypothetical protein CISIN_1g006155mg [Citrus sinensis]
9 Hb_149056_010 0.1198128621 - - hypothetical protein CICLE_v10016664mg [Citrus clementina]
10 Hb_000856_240 0.120208472 - - short chain alcohol dehydrogenase, putative [Ricinus communis]
11 Hb_003090_060 0.1223605306 - - PAR1 protein [Theobroma cacao]
12 Hb_151281_010 0.1229306491 - - PREDICTED: LOW QUALITY PROTEIN: probable L-type lectin-domain containing receptor kinase S.5 [Jatropha curcas]
13 Hb_001009_110 0.1250587714 - - PREDICTED: uncharacterized protein LOC105640232 [Jatropha curcas]
14 Hb_001838_010 0.1255490928 - - hypothetical protein POPTR_0005s18380g [Populus trichocarpa]
15 Hb_000030_260 0.1276417305 desease resistance Gene Name: NB-ARC leucine-rich repeat containing protein, putative [Ricinus communis]
16 Hb_118777_010 0.1277659268 - - leucine-rich repeat-containing protein, putative [Ricinus communis]
17 Hb_003636_010 0.131988841 - - hypothetical protein CISIN_1g037850mg, partial [Citrus sinensis]
18 Hb_005054_300 0.1338609283 - - aquaporin [Hevea brasiliensis]
19 Hb_002085_070 0.1352034656 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
20 Hb_020648_020 0.1353802072 - - xenotropic and polytropic murine leukemia virus receptor pho1, putative [Ricinus communis]

Gene co-expression network

sample Hb_011791_010 Hb_011791_010 Hb_000676_030 Hb_000676_030 Hb_011791_010--Hb_000676_030 Hb_002219_090 Hb_002219_090 Hb_011791_010--Hb_002219_090 Hb_001073_060 Hb_001073_060 Hb_011791_010--Hb_001073_060 Hb_079955_010 Hb_079955_010 Hb_011791_010--Hb_079955_010 Hb_000333_130 Hb_000333_130 Hb_011791_010--Hb_000333_130 Hb_106969_010 Hb_106969_010 Hb_011791_010--Hb_106969_010 Hb_002621_030 Hb_002621_030 Hb_000676_030--Hb_002621_030 Hb_000676_030--Hb_001073_060 Hb_000676_030--Hb_002219_090 Hb_000676_030--Hb_079955_010 Hb_005000_200 Hb_005000_200 Hb_000676_030--Hb_005000_200 Hb_149056_010 Hb_149056_010 Hb_002219_090--Hb_149056_010 Hb_002219_090--Hb_001073_060 Hb_017417_030 Hb_017417_030 Hb_002219_090--Hb_017417_030 Hb_001009_110 Hb_001009_110 Hb_002219_090--Hb_001009_110 Hb_000856_240 Hb_000856_240 Hb_001073_060--Hb_000856_240 Hb_001073_060--Hb_000333_130 Hb_001073_060--Hb_149056_010 Hb_151281_010 Hb_151281_010 Hb_079955_010--Hb_151281_010 Hb_003090_060 Hb_003090_060 Hb_079955_010--Hb_003090_060 Hb_079955_010--Hb_002621_030 Hb_131591_010 Hb_131591_010 Hb_079955_010--Hb_131591_010 Hb_111985_060 Hb_111985_060 Hb_079955_010--Hb_111985_060 Hb_000333_130--Hb_106969_010 Hb_000333_130--Hb_149056_010 Hb_000333_130--Hb_001009_110 Hb_000333_130--Hb_002219_090 Hb_011909_030 Hb_011909_030 Hb_106969_010--Hb_011909_030 Hb_001838_010 Hb_001838_010 Hb_106969_010--Hb_001838_010 Hb_118777_010 Hb_118777_010 Hb_106969_010--Hb_118777_010 Hb_003117_060 Hb_003117_060 Hb_106969_010--Hb_003117_060 Hb_000345_190 Hb_000345_190 Hb_106969_010--Hb_000345_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0113791 9.51483 1.16305 1.46641 0 0.029898
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0258849 0 0.0769657 4.64047 0.342987

CAGE analysis