Hb_001691_190

Information

Type -
Description -
Location Contig1691: 249109-249790
Sequence    

Annotation

kegg
ID rcu:RCOM_0936380
description hypothetical protein
nr
ID XP_002519061.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID B9RZ92
description CASP-like protein 1C2 OS=Ricinus communis GN=RCOM_0936380 PE=3 SV=1
trembl
ID A0A067JB25
description CASP-like protein OS=Jatropha curcas GN=JCGZ_21438 PE=3 SV=1
Gene Ontology
ID GO:0005886
description casp-like protein 1c2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001691_190 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000170_230 0.1022501494 - - PREDICTED: probable receptor-like protein kinase At1g11050 isoform X1 [Jatropha curcas]
3 Hb_131591_010 0.1099399344 - - PREDICTED: cytochrome P450 83B1-like [Jatropha curcas]
4 Hb_000270_010 0.1211847967 - - conserved hypothetical protein [Ricinus communis]
5 Hb_029866_140 0.1217636404 - - PREDICTED: hevamine-A [Jatropha curcas]
6 Hb_004586_380 0.1234613346 - - purine transporter, putative [Ricinus communis]
7 Hb_133646_010 0.1257057357 - - hypothetical protein RCOM_1044030 [Ricinus communis]
8 Hb_000431_180 0.1276347865 - - PREDICTED: peroxidase 55 [Jatropha curcas]
9 Hb_151281_010 0.1287981591 - - PREDICTED: LOW QUALITY PROTEIN: probable L-type lectin-domain containing receptor kinase S.5 [Jatropha curcas]
10 Hb_011928_030 0.1293557013 - - PREDICTED: probable calcium-binding protein CML23 [Jatropha curcas]
11 Hb_079955_010 0.1298451052 transcription factor TF Family: MYB-related PREDICTED: myb-related protein Myb4-like [Populus euphratica]
12 Hb_000532_060 0.1323267917 - - copper-transporting atpase p-type, putative [Ricinus communis]
13 Hb_176149_010 0.132972389 - - hypothetical protein JCGZ_16793 [Jatropha curcas]
14 Hb_000128_010 0.1330925482 - - dimethylaniline monooxygenase, putative [Ricinus communis]
15 Hb_006351_080 0.1340684469 - - hypothetical protein B456_011G275400 [Gossypium raimondii]
16 Hb_003090_060 0.1387855822 - - PAR1 protein [Theobroma cacao]
17 Hb_017417_020 0.140724544 - - DUF26 domain-containing protein 2 precursor, putative [Ricinus communis]
18 Hb_002621_030 0.1428465642 - - hypothetical protein CISIN_1g006155mg [Citrus sinensis]
19 Hb_001373_080 0.1436244488 desease resistance Gene Name: NB-ARC leucine-rich repeat-containing protein, putative [Ricinus communis]
20 Hb_000345_190 0.1464219477 transcription factor TF Family: C2H2 hypothetical protein POPTR_0005s02730g [Populus trichocarpa]

Gene co-expression network

sample Hb_001691_190 Hb_001691_190 Hb_000170_230 Hb_000170_230 Hb_001691_190--Hb_000170_230 Hb_131591_010 Hb_131591_010 Hb_001691_190--Hb_131591_010 Hb_000270_010 Hb_000270_010 Hb_001691_190--Hb_000270_010 Hb_029866_140 Hb_029866_140 Hb_001691_190--Hb_029866_140 Hb_004586_380 Hb_004586_380 Hb_001691_190--Hb_004586_380 Hb_133646_010 Hb_133646_010 Hb_001691_190--Hb_133646_010 Hb_000532_060 Hb_000532_060 Hb_000170_230--Hb_000532_060 Hb_046117_050 Hb_046117_050 Hb_000170_230--Hb_046117_050 Hb_000345_190 Hb_000345_190 Hb_000170_230--Hb_000345_190 Hb_001487_020 Hb_001487_020 Hb_000170_230--Hb_001487_020 Hb_005081_080 Hb_005081_080 Hb_000170_230--Hb_005081_080 Hb_151281_010 Hb_151281_010 Hb_131591_010--Hb_151281_010 Hb_002621_030 Hb_002621_030 Hb_131591_010--Hb_002621_030 Hb_079955_010 Hb_079955_010 Hb_131591_010--Hb_079955_010 Hb_000676_030 Hb_000676_030 Hb_131591_010--Hb_000676_030 Hb_003090_060 Hb_003090_060 Hb_131591_010--Hb_003090_060 Hb_017417_020 Hb_017417_020 Hb_000270_010--Hb_017417_020 Hb_000431_180 Hb_000431_180 Hb_000270_010--Hb_000431_180 Hb_069232_010 Hb_069232_010 Hb_000270_010--Hb_069232_010 Hb_001131_100 Hb_001131_100 Hb_000270_010--Hb_001131_100 Hb_011928_030 Hb_011928_030 Hb_000270_010--Hb_011928_030 Hb_000656_360 Hb_000656_360 Hb_029866_140--Hb_000656_360 Hb_001376_020 Hb_001376_020 Hb_029866_140--Hb_001376_020 Hb_003847_140 Hb_003847_140 Hb_029866_140--Hb_003847_140 Hb_008707_020 Hb_008707_020 Hb_029866_140--Hb_008707_020 Hb_176149_010 Hb_176149_010 Hb_029866_140--Hb_176149_010 Hb_011054_030 Hb_011054_030 Hb_029866_140--Hb_011054_030 Hb_006351_080 Hb_006351_080 Hb_004586_380--Hb_006351_080 Hb_004586_380--Hb_176149_010 Hb_000128_010 Hb_000128_010 Hb_004586_380--Hb_000128_010 Hb_004098_010 Hb_004098_010 Hb_004586_380--Hb_004098_010 Hb_004586_380--Hb_000656_360 Hb_119441_010 Hb_119441_010 Hb_004586_380--Hb_119441_010 Hb_133646_010--Hb_176149_010 Hb_133646_010--Hb_000656_360 Hb_133646_010--Hb_004098_010 Hb_027913_010 Hb_027913_010 Hb_133646_010--Hb_027913_010 Hb_000347_370 Hb_000347_370 Hb_133646_010--Hb_000347_370 Hb_001510_050 Hb_001510_050 Hb_133646_010--Hb_001510_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.74524 0.140711 0.698592 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.936728 0

CAGE analysis