Hb_069232_010

Information

Type -
Description -
Location Contig69232: 90-381
Sequence    

Annotation

kegg
ID vvi:100247371
description 60S ribosomal protein L37-3-like
nr
ID XP_002284249.1
description PREDICTED: 60S ribosomal protein L37-3-like [Vitis vinifera]
swissprot
ID Q43292
description 60S ribosomal protein L37-2 OS=Arabidopsis thaliana GN=RPL37B PE=3 SV=2
trembl
ID F6H2Y8
description Ribosomal protein L37 OS=Vitis vinifera GN=VIT_04s0008g03900 PE=3 SV=1
Gene Ontology
ID GO:0005840
description 60s ribosomal protein l37-3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_069232_010 0.0 - - PREDICTED: 60S ribosomal protein L37-3-like [Vitis vinifera]
2 Hb_017417_020 0.0589127141 - - DUF26 domain-containing protein 2 precursor, putative [Ricinus communis]
3 Hb_081448_010 0.061866811 - - hypothetical protein JCGZ_11284 [Jatropha curcas]
4 Hb_000703_320 0.0985824513 - - receptor-kinase, putative [Ricinus communis]
5 Hb_000270_010 0.111501122 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000331_690 0.1176706123 - - PREDICTED: F-box/WD repeat-containing protein 11-like [Jatropha curcas]
7 Hb_005203_010 0.1190432969 - - PREDICTED: probable nucleolar protein 5-1 [Jatropha curcas]
8 Hb_005081_080 0.1200305159 - - hypothetical protein JCGZ_16787 [Jatropha curcas]
9 Hb_000431_180 0.1235359659 - - PREDICTED: peroxidase 55 [Jatropha curcas]
10 Hb_031862_090 0.137124282 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1-like [Jatropha curcas]
11 Hb_001021_140 0.1400159071 transcription factor TF Family: C2H2 PREDICTED: protein indeterminate-domain 2-like [Jatropha curcas]
12 Hb_005380_030 0.1423869228 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase B120 isoform X2 [Jatropha curcas]
13 Hb_001691_190 0.1533438371 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000170_230 0.1568665209 - - PREDICTED: probable receptor-like protein kinase At1g11050 isoform X1 [Jatropha curcas]
15 Hb_027445_080 0.1583674856 transcription factor TF Family: LOB LOB domain protein 25 [Populus trichocarpa]
16 Hb_135811_060 0.1603397837 - - PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]
17 Hb_000128_010 0.1649099409 - - dimethylaniline monooxygenase, putative [Ricinus communis]
18 Hb_002241_020 0.1721072909 - - PREDICTED: salicylic acid-binding protein 2-like [Jatropha curcas]
19 Hb_005147_020 0.1756393739 - - PREDICTED: uncharacterized protein LOC105629671 [Jatropha curcas]
20 Hb_017661_020 0.1775855386 - - hypothetical protein JCGZ_11176 [Jatropha curcas]

Gene co-expression network

sample Hb_069232_010 Hb_069232_010 Hb_017417_020 Hb_017417_020 Hb_069232_010--Hb_017417_020 Hb_081448_010 Hb_081448_010 Hb_069232_010--Hb_081448_010 Hb_000703_320 Hb_000703_320 Hb_069232_010--Hb_000703_320 Hb_000270_010 Hb_000270_010 Hb_069232_010--Hb_000270_010 Hb_000331_690 Hb_000331_690 Hb_069232_010--Hb_000331_690 Hb_005203_010 Hb_005203_010 Hb_069232_010--Hb_005203_010 Hb_017417_020--Hb_000270_010 Hb_017417_020--Hb_000331_690 Hb_017417_020--Hb_081448_010 Hb_000128_010 Hb_000128_010 Hb_017417_020--Hb_000128_010 Hb_000431_180 Hb_000431_180 Hb_017417_020--Hb_000431_180 Hb_001021_140 Hb_001021_140 Hb_081448_010--Hb_001021_140 Hb_081448_010--Hb_000703_320 Hb_005081_080 Hb_005081_080 Hb_081448_010--Hb_005081_080 Hb_031862_090 Hb_031862_090 Hb_081448_010--Hb_031862_090 Hb_081448_010--Hb_005203_010 Hb_000703_320--Hb_000431_180 Hb_005380_030 Hb_005380_030 Hb_000703_320--Hb_005380_030 Hb_135811_060 Hb_135811_060 Hb_000703_320--Hb_135811_060 Hb_000703_320--Hb_001021_140 Hb_000270_010--Hb_000431_180 Hb_001691_190 Hb_001691_190 Hb_000270_010--Hb_001691_190 Hb_001131_100 Hb_001131_100 Hb_000270_010--Hb_001131_100 Hb_011928_030 Hb_011928_030 Hb_000270_010--Hb_011928_030 Hb_000331_690--Hb_001131_100 Hb_000331_690--Hb_000270_010 Hb_000331_690--Hb_005380_030 Hb_008554_010 Hb_008554_010 Hb_000331_690--Hb_008554_010 Hb_005203_010--Hb_031862_090 Hb_027445_080 Hb_027445_080 Hb_005203_010--Hb_027445_080 Hb_002282_030 Hb_002282_030 Hb_005203_010--Hb_002282_030 Hb_000891_060 Hb_000891_060 Hb_005203_010--Hb_000891_060 Hb_000616_060 Hb_000616_060 Hb_005203_010--Hb_000616_060 Hb_000575_010 Hb_000575_010 Hb_005203_010--Hb_000575_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 238.271 0 84.1415 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 83.6841 0

CAGE analysis