Hb_017417_020

Information

Type -
Description -
Location Contig17417: 5560-6297
Sequence    

Annotation

kegg
ID rcu:RCOM_0366110
description DUF26 domain-containing protein 2 precursor, putative
nr
ID XP_002533571.1
description DUF26 domain-containing protein 2 precursor, putative [Ricinus communis]
swissprot
ID Q9LRJ9
description Cysteine-rich repeat secretory protein 38 OS=Arabidopsis thaliana GN=CRRSP38 PE=2 SV=1
trembl
ID B9T5Q2
description DUF26 domain-containing protein 2, putative OS=Ricinus communis GN=RCOM_0366110 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_017417_020 0.0 - - DUF26 domain-containing protein 2 precursor, putative [Ricinus communis]
2 Hb_069232_010 0.0589127141 - - PREDICTED: 60S ribosomal protein L37-3-like [Vitis vinifera]
3 Hb_000270_010 0.0902395816 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000331_690 0.1074625453 - - PREDICTED: F-box/WD repeat-containing protein 11-like [Jatropha curcas]
5 Hb_081448_010 0.1198050448 - - hypothetical protein JCGZ_11284 [Jatropha curcas]
6 Hb_000128_010 0.1248941416 - - dimethylaniline monooxygenase, putative [Ricinus communis]
7 Hb_000431_180 0.1341365124 - - PREDICTED: peroxidase 55 [Jatropha curcas]
8 Hb_000703_320 0.1354737644 - - receptor-kinase, putative [Ricinus communis]
9 Hb_001691_190 0.140724544 - - conserved hypothetical protein [Ricinus communis]
10 Hb_004098_010 0.1452316174 - - -
11 Hb_001131_100 0.1496578261 - - PREDICTED: uncharacterized protein LOC105638386 [Jatropha curcas]
12 Hb_176149_010 0.1501980595 - - hypothetical protein JCGZ_16793 [Jatropha curcas]
13 Hb_005081_080 0.1576931723 - - hypothetical protein JCGZ_16787 [Jatropha curcas]
14 Hb_005380_030 0.1585286365 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase B120 isoform X2 [Jatropha curcas]
15 Hb_004586_380 0.1594346198 - - purine transporter, putative [Ricinus communis]
16 Hb_004089_010 0.1611526557 - - hypothetical protein MIMGU_mgv1a018902mg [Erythranthe guttata]
17 Hb_000170_230 0.162622754 - - PREDICTED: probable receptor-like protein kinase At1g11050 isoform X1 [Jatropha curcas]
18 Hb_006351_080 0.1643103849 - - hypothetical protein B456_011G275400 [Gossypium raimondii]
19 Hb_005203_010 0.1665040636 - - PREDICTED: probable nucleolar protein 5-1 [Jatropha curcas]
20 Hb_133646_010 0.1697693048 - - hypothetical protein RCOM_1044030 [Ricinus communis]

Gene co-expression network

sample Hb_017417_020 Hb_017417_020 Hb_069232_010 Hb_069232_010 Hb_017417_020--Hb_069232_010 Hb_000270_010 Hb_000270_010 Hb_017417_020--Hb_000270_010 Hb_000331_690 Hb_000331_690 Hb_017417_020--Hb_000331_690 Hb_081448_010 Hb_081448_010 Hb_017417_020--Hb_081448_010 Hb_000128_010 Hb_000128_010 Hb_017417_020--Hb_000128_010 Hb_000431_180 Hb_000431_180 Hb_017417_020--Hb_000431_180 Hb_069232_010--Hb_081448_010 Hb_000703_320 Hb_000703_320 Hb_069232_010--Hb_000703_320 Hb_069232_010--Hb_000270_010 Hb_069232_010--Hb_000331_690 Hb_005203_010 Hb_005203_010 Hb_069232_010--Hb_005203_010 Hb_000270_010--Hb_000431_180 Hb_001691_190 Hb_001691_190 Hb_000270_010--Hb_001691_190 Hb_001131_100 Hb_001131_100 Hb_000270_010--Hb_001131_100 Hb_011928_030 Hb_011928_030 Hb_000270_010--Hb_011928_030 Hb_000331_690--Hb_001131_100 Hb_000331_690--Hb_000270_010 Hb_005380_030 Hb_005380_030 Hb_000331_690--Hb_005380_030 Hb_008554_010 Hb_008554_010 Hb_000331_690--Hb_008554_010 Hb_001021_140 Hb_001021_140 Hb_081448_010--Hb_001021_140 Hb_081448_010--Hb_000703_320 Hb_005081_080 Hb_005081_080 Hb_081448_010--Hb_005081_080 Hb_031862_090 Hb_031862_090 Hb_081448_010--Hb_031862_090 Hb_081448_010--Hb_005203_010 Hb_004098_010 Hb_004098_010 Hb_000128_010--Hb_004098_010 Hb_176149_010 Hb_176149_010 Hb_000128_010--Hb_176149_010 Hb_006351_080 Hb_006351_080 Hb_000128_010--Hb_006351_080 Hb_000369_150 Hb_000369_150 Hb_000128_010--Hb_000369_150 Hb_004586_380 Hb_004586_380 Hb_000128_010--Hb_004586_380 Hb_119441_010 Hb_119441_010 Hb_000128_010--Hb_119441_010 Hb_000431_180--Hb_000703_320 Hb_005147_020 Hb_005147_020 Hb_000431_180--Hb_005147_020 Hb_131591_010 Hb_131591_010 Hb_000431_180--Hb_131591_010 Hb_017661_020 Hb_017661_020 Hb_000431_180--Hb_017661_020 Hb_000431_180--Hb_069232_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0991346 0 0.031373 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0240093 0

CAGE analysis