Hb_000703_320

Information

Type -
Description -
Location Contig703: 295539-298933
Sequence    

Annotation

kegg
ID rcu:RCOM_0901450
description receptor-kinase, putative (EC:1.3.1.74 2.7.10.2)
nr
ID XP_002517677.1
description receptor-kinase, putative [Ricinus communis]
swissprot
ID C0LGP4
description Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=2 SV=1
trembl
ID B9RVA8
description Receptor-kinase, putative OS=Ricinus communis GN=RCOM_0901450 PE=4 SV=1
Gene Ontology
ID GO:0016020
description probable lrr receptor-like serine threonine-protein kinase at3g47570

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_54967: 297399-298873
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000703_320 0.0 - - receptor-kinase, putative [Ricinus communis]
2 Hb_081448_010 0.0912499123 - - hypothetical protein JCGZ_11284 [Jatropha curcas]
3 Hb_069232_010 0.0985824513 - - PREDICTED: 60S ribosomal protein L37-3-like [Vitis vinifera]
4 Hb_000431_180 0.0995365294 - - PREDICTED: peroxidase 55 [Jatropha curcas]
5 Hb_005380_030 0.1024776415 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase B120 isoform X2 [Jatropha curcas]
6 Hb_135811_060 0.1055830219 - - PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]
7 Hb_001021_140 0.114978037 transcription factor TF Family: C2H2 PREDICTED: protein indeterminate-domain 2-like [Jatropha curcas]
8 Hb_005203_010 0.1227347105 - - PREDICTED: probable nucleolar protein 5-1 [Jatropha curcas]
9 Hb_027445_080 0.1229160505 transcription factor TF Family: LOB LOB domain protein 25 [Populus trichocarpa]
10 Hb_005081_080 0.1249641628 - - hypothetical protein JCGZ_16787 [Jatropha curcas]
11 Hb_031862_090 0.1286949155 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1-like [Jatropha curcas]
12 Hb_000270_010 0.1345665504 - - conserved hypothetical protein [Ricinus communis]
13 Hb_017417_020 0.1354737644 - - DUF26 domain-containing protein 2 precursor, putative [Ricinus communis]
14 Hb_017661_020 0.1371505015 - - hypothetical protein JCGZ_11176 [Jatropha curcas]
15 Hb_005147_020 0.1429492408 - - PREDICTED: uncharacterized protein LOC105629671 [Jatropha curcas]
16 Hb_002762_070 0.1458457671 transcription factor TF Family: HB homeobox protein knotted-1, putative [Ricinus communis]
17 Hb_002110_210 0.1471140125 - - purine transporter, putative [Ricinus communis]
18 Hb_000935_070 0.1505073828 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
19 Hb_002735_010 0.1512272219 - - PREDICTED: CLAVATA3/ESR (CLE)-related protein 44 [Prunus mume]
20 Hb_028207_030 0.1519639993 - - PREDICTED: non-specific lipid-transfer protein 8-like [Citrus sinensis]

Gene co-expression network

sample Hb_000703_320 Hb_000703_320 Hb_081448_010 Hb_081448_010 Hb_000703_320--Hb_081448_010 Hb_069232_010 Hb_069232_010 Hb_000703_320--Hb_069232_010 Hb_000431_180 Hb_000431_180 Hb_000703_320--Hb_000431_180 Hb_005380_030 Hb_005380_030 Hb_000703_320--Hb_005380_030 Hb_135811_060 Hb_135811_060 Hb_000703_320--Hb_135811_060 Hb_001021_140 Hb_001021_140 Hb_000703_320--Hb_001021_140 Hb_081448_010--Hb_069232_010 Hb_081448_010--Hb_001021_140 Hb_005081_080 Hb_005081_080 Hb_081448_010--Hb_005081_080 Hb_031862_090 Hb_031862_090 Hb_081448_010--Hb_031862_090 Hb_005203_010 Hb_005203_010 Hb_081448_010--Hb_005203_010 Hb_017417_020 Hb_017417_020 Hb_069232_010--Hb_017417_020 Hb_000270_010 Hb_000270_010 Hb_069232_010--Hb_000270_010 Hb_000331_690 Hb_000331_690 Hb_069232_010--Hb_000331_690 Hb_069232_010--Hb_005203_010 Hb_000431_180--Hb_000270_010 Hb_005147_020 Hb_005147_020 Hb_000431_180--Hb_005147_020 Hb_131591_010 Hb_131591_010 Hb_000431_180--Hb_131591_010 Hb_017661_020 Hb_017661_020 Hb_000431_180--Hb_017661_020 Hb_000431_180--Hb_069232_010 Hb_002110_210 Hb_002110_210 Hb_005380_030--Hb_002110_210 Hb_002241_020 Hb_002241_020 Hb_005380_030--Hb_002241_020 Hb_005380_030--Hb_005147_020 Hb_002248_090 Hb_002248_090 Hb_005380_030--Hb_002248_090 Hb_002735_010 Hb_002735_010 Hb_005380_030--Hb_002735_010 Hb_017417_030 Hb_017417_030 Hb_135811_060--Hb_017417_030 Hb_000856_240 Hb_000856_240 Hb_135811_060--Hb_000856_240 Hb_000045_180 Hb_000045_180 Hb_135811_060--Hb_000045_180 Hb_149056_010 Hb_149056_010 Hb_135811_060--Hb_149056_010 Hb_135811_060--Hb_005081_080 Hb_001021_140--Hb_031862_090 Hb_001021_140--Hb_005081_080 Hb_000077_470 Hb_000077_470 Hb_001021_140--Hb_000077_470 Hb_004341_010 Hb_004341_010 Hb_001021_140--Hb_004341_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 11.6787 0.201591 4.66406 0.0176801 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0272904 0.0214758 0 5.32193 0.0688015

CAGE analysis