Hb_000077_470

Information

Type -
Description -
Location Contig77: 337939-339457
Sequence    

Annotation

kegg
ID pmum:103342359
description OMT1; caffeic acid 3-O-methyltransferase-like
nr
ID XP_012088325.1
description PREDICTED: anthranilate N-methyltransferase-like [Jatropha curcas]
swissprot
ID Q8W013
description Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1
trembl
ID A0A067JXB3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25821 PE=4 SV=1
Gene Ontology
ID GO:0016740
description caffeic acid 3-o-methyltransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000077_470 0.0 - - PREDICTED: anthranilate N-methyltransferase-like [Jatropha curcas]
2 Hb_009083_080 0.0948792758 - - conserved hypothetical protein [Ricinus communis]
3 Hb_003253_060 0.1029647343 - - PREDICTED: tropinone reductase-like 1 [Vitis vinifera]
4 Hb_001157_150 0.1147070777 - - PREDICTED: transmembrane protein 45A-like [Jatropha curcas]
5 Hb_001021_140 0.1150987122 transcription factor TF Family: C2H2 PREDICTED: protein indeterminate-domain 2-like [Jatropha curcas]
6 Hb_005081_080 0.1210710599 - - hypothetical protein JCGZ_16787 [Jatropha curcas]
7 Hb_006418_010 0.129367835 - - PREDICTED: cytochrome P450 76A1-like [Jatropha curcas]
8 Hb_000380_040 0.1307527207 - - bel1 homeotic protein, putative [Ricinus communis]
9 Hb_001487_020 0.1315598488 - - PREDICTED: probable sulfate transporter 3.5 isoform X1 [Jatropha curcas]
10 Hb_001953_130 0.1332003188 - - PREDICTED: uncharacterized protein LOC105648901 [Jatropha curcas]
11 Hb_004656_020 0.1370698403 - - EF hand domain-containing protein, variant [Neurospora crassa OR74A]
12 Hb_033006_040 0.1404537114 - - sulfate transporter, putative [Ricinus communis]
13 Hb_046117_050 0.1472347161 transcription factor TF Family: C2H2 hypothetical protein POPTR_0009s14590g [Populus trichocarpa]
14 Hb_047690_010 0.1503553578 - - Phosphoprotein phosphatase [Theobroma cacao]
15 Hb_000141_220 0.1532763597 - - PREDICTED: 14 kDa proline-rich protein DC2.15-like [Gossypium raimondii]
16 Hb_002003_020 0.1533255099 - - PREDICTED: UDP-glycosyltransferase 74F1-like [Jatropha curcas]
17 Hb_004136_050 0.1542196641 - - -
18 Hb_000260_320 0.1556000635 - - PREDICTED: uncharacterized protein LOC105649058 [Jatropha curcas]
19 Hb_011909_030 0.1569396521 - - hypothetical protein JCGZ_00732 [Jatropha curcas]
20 Hb_000236_360 0.1584517576 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2 [Prunus mume]

Gene co-expression network

sample Hb_000077_470 Hb_000077_470 Hb_009083_080 Hb_009083_080 Hb_000077_470--Hb_009083_080 Hb_003253_060 Hb_003253_060 Hb_000077_470--Hb_003253_060 Hb_001157_150 Hb_001157_150 Hb_000077_470--Hb_001157_150 Hb_001021_140 Hb_001021_140 Hb_000077_470--Hb_001021_140 Hb_005081_080 Hb_005081_080 Hb_000077_470--Hb_005081_080 Hb_006418_010 Hb_006418_010 Hb_000077_470--Hb_006418_010 Hb_004656_020 Hb_004656_020 Hb_009083_080--Hb_004656_020 Hb_009083_080--Hb_003253_060 Hb_009083_080--Hb_006418_010 Hb_181092_010 Hb_181092_010 Hb_009083_080--Hb_181092_010 Hb_000380_040 Hb_000380_040 Hb_009083_080--Hb_000380_040 Hb_003253_060--Hb_004656_020 Hb_047690_010 Hb_047690_010 Hb_003253_060--Hb_047690_010 Hb_001487_020 Hb_001487_020 Hb_003253_060--Hb_001487_020 Hb_135811_020 Hb_135811_020 Hb_003253_060--Hb_135811_020 Hb_150643_010 Hb_150643_010 Hb_003253_060--Hb_150643_010 Hb_000236_360 Hb_000236_360 Hb_001157_150--Hb_000236_360 Hb_001157_150--Hb_000380_040 Hb_001157_150--Hb_009083_080 Hb_002003_020 Hb_002003_020 Hb_001157_150--Hb_002003_020 Hb_000334_250 Hb_000334_250 Hb_001157_150--Hb_000334_250 Hb_081448_010 Hb_081448_010 Hb_001021_140--Hb_081448_010 Hb_031862_090 Hb_031862_090 Hb_001021_140--Hb_031862_090 Hb_001021_140--Hb_005081_080 Hb_000703_320 Hb_000703_320 Hb_001021_140--Hb_000703_320 Hb_004341_010 Hb_004341_010 Hb_001021_140--Hb_004341_010 Hb_005081_080--Hb_001487_020 Hb_005081_080--Hb_081448_010 Hb_046117_050 Hb_046117_050 Hb_005081_080--Hb_046117_050 Hb_000170_230 Hb_000170_230 Hb_005081_080--Hb_000170_230 Hb_069232_010 Hb_069232_010 Hb_005081_080--Hb_069232_010 Hb_006418_010--Hb_004656_020 Hb_002019_030 Hb_002019_030 Hb_006418_010--Hb_002019_030 Hb_006418_010--Hb_003253_060 Hb_001376_040 Hb_001376_040 Hb_006418_010--Hb_001376_040 Hb_000185_060 Hb_000185_060 Hb_006418_010--Hb_000185_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 6.87266 0 1.45276 0 0.0248327
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 6.02287 0

CAGE analysis