Hb_002019_030

Information

Type -
Description -
Location Contig2019: 32586-33542
Sequence    

Annotation

kegg
ID rcu:RCOM_0574920
description kinase, putative (EC:2.7.10.1)
nr
ID XP_012066189.1
description PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
swissprot
ID D7SFH9
description Glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2 OS=Arabidopsis thaliana GN=GDPDL2 PE=1 SV=1
trembl
ID A0A067L2Z5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23768 PE=3 SV=1
Gene Ontology
ID GO:0000166
description probable receptor-like protein kinase at5g39020

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002019_030 0.0 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
2 Hb_006418_010 0.0955337785 - - PREDICTED: cytochrome P450 76A1-like [Jatropha curcas]
3 Hb_004656_020 0.1110798719 - - EF hand domain-containing protein, variant [Neurospora crassa OR74A]
4 Hb_003253_060 0.1192077001 - - PREDICTED: tropinone reductase-like 1 [Vitis vinifera]
5 Hb_000877_090 0.1279035592 - - allergenic-related protein Pt2L4 [Manihot esculenta]
6 Hb_001114_210 0.1293695603 - - PREDICTED: periaxin [Jatropha curcas]
7 Hb_009083_080 0.1300612103 - - conserved hypothetical protein [Ricinus communis]
8 Hb_001376_040 0.1321462686 transcription factor TF Family: MYB PREDICTED: transcription factor MYB86 [Populus euphratica]
9 Hb_000031_130 0.1372185604 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Populus euphratica]
10 Hb_007729_010 0.1388228464 - - unnamed protein product [Vitis vinifera]
11 Hb_128912_010 0.1408537126 - - PREDICTED: probable disease resistance protein At4g27220 [Jatropha curcas]
12 Hb_000260_320 0.1423036519 - - PREDICTED: uncharacterized protein LOC105649058 [Jatropha curcas]
13 Hb_135811_020 0.1430092008 - - hypothetical protein JCGZ_19965 [Jatropha curcas]
14 Hb_047690_010 0.1451951779 - - Phosphoprotein phosphatase [Theobroma cacao]
15 Hb_032443_030 0.1452752728 - - PREDICTED: protein SRG1-like [Jatropha curcas]
16 Hb_000116_390 0.1469376211 - - Mlo protein [Hevea brasiliensis]
17 Hb_006198_150 0.1479901954 - - -
18 Hb_005649_120 0.1521520227 - - Anthocyanin 5-aromatic acyltransferase, putative [Ricinus communis]
19 Hb_049562_010 0.1532531412 - - hypothetical protein JCGZ_25442 [Jatropha curcas]
20 Hb_001080_040 0.1534684048 - - cytochrome P450, putative [Ricinus communis]

Gene co-expression network

sample Hb_002019_030 Hb_002019_030 Hb_006418_010 Hb_006418_010 Hb_002019_030--Hb_006418_010 Hb_004656_020 Hb_004656_020 Hb_002019_030--Hb_004656_020 Hb_003253_060 Hb_003253_060 Hb_002019_030--Hb_003253_060 Hb_000877_090 Hb_000877_090 Hb_002019_030--Hb_000877_090 Hb_001114_210 Hb_001114_210 Hb_002019_030--Hb_001114_210 Hb_009083_080 Hb_009083_080 Hb_002019_030--Hb_009083_080 Hb_006418_010--Hb_009083_080 Hb_006418_010--Hb_004656_020 Hb_006418_010--Hb_003253_060 Hb_001376_040 Hb_001376_040 Hb_006418_010--Hb_001376_040 Hb_000185_060 Hb_000185_060 Hb_006418_010--Hb_000185_060 Hb_004656_020--Hb_003253_060 Hb_004656_020--Hb_001376_040 Hb_004656_020--Hb_009083_080 Hb_000031_130 Hb_000031_130 Hb_004656_020--Hb_000031_130 Hb_032443_030 Hb_032443_030 Hb_004656_020--Hb_032443_030 Hb_004656_020--Hb_001114_210 Hb_047690_010 Hb_047690_010 Hb_003253_060--Hb_047690_010 Hb_003253_060--Hb_009083_080 Hb_001487_020 Hb_001487_020 Hb_003253_060--Hb_001487_020 Hb_135811_020 Hb_135811_020 Hb_003253_060--Hb_135811_020 Hb_150643_010 Hb_150643_010 Hb_003253_060--Hb_150643_010 Hb_000260_320 Hb_000260_320 Hb_000877_090--Hb_000260_320 Hb_012055_100 Hb_012055_100 Hb_000877_090--Hb_012055_100 Hb_003376_340 Hb_003376_340 Hb_000877_090--Hb_003376_340 Hb_000532_060 Hb_000532_060 Hb_000877_090--Hb_000532_060 Hb_046117_050 Hb_046117_050 Hb_000877_090--Hb_046117_050 Hb_001114_210--Hb_001376_040 Hb_001114_210--Hb_000031_130 Hb_049562_010 Hb_049562_010 Hb_001114_210--Hb_049562_010 Hb_005649_120 Hb_005649_120 Hb_001114_210--Hb_005649_120 Hb_001080_040 Hb_001080_040 Hb_001114_210--Hb_001080_040 Hb_008062_020 Hb_008062_020 Hb_001114_210--Hb_008062_020 Hb_181092_010 Hb_181092_010 Hb_009083_080--Hb_181092_010 Hb_000077_470 Hb_000077_470 Hb_009083_080--Hb_000077_470 Hb_000380_040 Hb_000380_040 Hb_009083_080--Hb_000380_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.41512 0 0.130055 0.0493826 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0583839 0 0 1.7778 0

CAGE analysis