Hb_005649_120

Information

Type -
Description -
Location Contig5649: 72093-83836
Sequence    

Annotation

kegg
ID rcu:RCOM_1026270
description Anthocyanin 5-aromatic acyltransferase, putative (EC:2.3.1.153)
nr
ID XP_002527623.1
description Anthocyanin 5-aromatic acyltransferase, putative [Ricinus communis]
swissprot
ID Q940Z5
description Phenolic glucoside malonyltransferase 1 OS=Arabidopsis thaliana GN=PMAT1 PE=1 SV=1
trembl
ID B9SNQ4
description Anthocyanin 5-aromatic acyltransferase, putative OS=Ricinus communis GN=RCOM_1026270 PE=4 SV=1
Gene Ontology
ID GO:0016747
description anthocyanin 5-aromatic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005649_120 0.0 - - Anthocyanin 5-aromatic acyltransferase, putative [Ricinus communis]
2 Hb_049562_010 0.0261311569 - - hypothetical protein JCGZ_25442 [Jatropha curcas]
3 Hb_007627_020 0.0433464503 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
4 Hb_030602_030 0.0433536447 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
5 Hb_005673_010 0.0433744414 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
6 Hb_068533_010 0.0434808414 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
7 Hb_004458_020 0.0434954362 - - retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group]
8 Hb_005211_200 0.0435152688 - - PREDICTED: uncharacterized protein LOC105650390, partial [Jatropha curcas]
9 Hb_007187_020 0.0435427482 - - hypothetical protein POPTR_0001s43680g, partial [Populus trichocarpa]
10 Hb_000696_280 0.0435906255 - - protein phosphatase-2c, putative [Ricinus communis]
11 Hb_005181_100 0.0438009458 - - hypothetical protein POPTR_0010s15550g [Populus trichocarpa]
12 Hb_000000_350 0.0438883885 - - -
13 Hb_000107_010 0.0438995326 - - -
14 Hb_037949_010 0.0439967972 - - hypothetical protein JCGZ_11175 [Jatropha curcas]
15 Hb_000984_090 0.0440358127 - - -
16 Hb_002400_130 0.0441620597 - - PREDICTED: uncharacterized protein LOC105637626 [Jatropha curcas]
17 Hb_005144_200 0.0443285533 - - PREDICTED: uncharacterized protein LOC105642066 [Jatropha curcas]
18 Hb_113631_010 0.0444542319 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
19 Hb_000029_250 0.0445954323 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000352_250 0.0447141046 - - -

Gene co-expression network

sample Hb_005649_120 Hb_005649_120 Hb_049562_010 Hb_049562_010 Hb_005649_120--Hb_049562_010 Hb_007627_020 Hb_007627_020 Hb_005649_120--Hb_007627_020 Hb_030602_030 Hb_030602_030 Hb_005649_120--Hb_030602_030 Hb_005673_010 Hb_005673_010 Hb_005649_120--Hb_005673_010 Hb_068533_010 Hb_068533_010 Hb_005649_120--Hb_068533_010 Hb_004458_020 Hb_004458_020 Hb_005649_120--Hb_004458_020 Hb_175426_010 Hb_175426_010 Hb_049562_010--Hb_175426_010 Hb_001080_040 Hb_001080_040 Hb_049562_010--Hb_001080_040 Hb_002154_090 Hb_002154_090 Hb_049562_010--Hb_002154_090 Hb_000238_010 Hb_000238_010 Hb_049562_010--Hb_000238_010 Hb_049562_010--Hb_007627_020 Hb_007627_020--Hb_030602_030 Hb_007627_020--Hb_005673_010 Hb_007627_020--Hb_068533_010 Hb_007627_020--Hb_004458_020 Hb_005211_200 Hb_005211_200 Hb_007627_020--Hb_005211_200 Hb_007187_020 Hb_007187_020 Hb_007627_020--Hb_007187_020 Hb_030602_030--Hb_005673_010 Hb_030602_030--Hb_068533_010 Hb_030602_030--Hb_004458_020 Hb_030602_030--Hb_005211_200 Hb_030602_030--Hb_007187_020 Hb_005673_010--Hb_068533_010 Hb_005673_010--Hb_004458_020 Hb_005673_010--Hb_005211_200 Hb_005673_010--Hb_007187_020 Hb_068533_010--Hb_004458_020 Hb_068533_010--Hb_005211_200 Hb_068533_010--Hb_007187_020 Hb_000696_280 Hb_000696_280 Hb_068533_010--Hb_000696_280 Hb_004458_020--Hb_005211_200 Hb_004458_020--Hb_007187_020 Hb_004458_020--Hb_000696_280
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.32507 0.00496382 0.00949549 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.60944 0

CAGE analysis