Hb_081448_010

Information

Type -
Description -
Location Contig81448: 1570-2901
Sequence    

Annotation

kegg
ID bvg:104900936
description uncharacterized LOC104900936
nr
ID KDP34728.1
description hypothetical protein JCGZ_11284 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KID4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11284 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_081448_010 0.0 - - hypothetical protein JCGZ_11284 [Jatropha curcas]
2 Hb_069232_010 0.061866811 - - PREDICTED: 60S ribosomal protein L37-3-like [Vitis vinifera]
3 Hb_001021_140 0.0833122402 transcription factor TF Family: C2H2 PREDICTED: protein indeterminate-domain 2-like [Jatropha curcas]
4 Hb_000703_320 0.0912499123 - - receptor-kinase, putative [Ricinus communis]
5 Hb_005081_080 0.0915234855 - - hypothetical protein JCGZ_16787 [Jatropha curcas]
6 Hb_031862_090 0.0941687386 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1-like [Jatropha curcas]
7 Hb_005203_010 0.0982211759 - - PREDICTED: probable nucleolar protein 5-1 [Jatropha curcas]
8 Hb_017417_020 0.1198050448 - - DUF26 domain-containing protein 2 precursor, putative [Ricinus communis]
9 Hb_027445_080 0.1363461409 transcription factor TF Family: LOB LOB domain protein 25 [Populus trichocarpa]
10 Hb_135811_060 0.1427798233 - - PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]
11 Hb_000431_180 0.14346901 - - PREDICTED: peroxidase 55 [Jatropha curcas]
12 Hb_004341_010 0.1538260547 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
13 Hb_005380_030 0.1547669353 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase B120 isoform X2 [Jatropha curcas]
14 Hb_000270_010 0.1561928236 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000331_690 0.1571323534 - - PREDICTED: F-box/WD repeat-containing protein 11-like [Jatropha curcas]
16 Hb_000935_070 0.1573945124 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
17 Hb_000077_470 0.159755948 - - PREDICTED: anthranilate N-methyltransferase-like [Jatropha curcas]
18 Hb_004156_010 0.1607026605 - - hypothetical protein JCGZ_08917 [Jatropha curcas]
19 Hb_001487_020 0.1619428056 - - PREDICTED: probable sulfate transporter 3.5 isoform X1 [Jatropha curcas]
20 Hb_002762_070 0.1620590305 transcription factor TF Family: HB homeobox protein knotted-1, putative [Ricinus communis]

Gene co-expression network

sample Hb_081448_010 Hb_081448_010 Hb_069232_010 Hb_069232_010 Hb_081448_010--Hb_069232_010 Hb_001021_140 Hb_001021_140 Hb_081448_010--Hb_001021_140 Hb_000703_320 Hb_000703_320 Hb_081448_010--Hb_000703_320 Hb_005081_080 Hb_005081_080 Hb_081448_010--Hb_005081_080 Hb_031862_090 Hb_031862_090 Hb_081448_010--Hb_031862_090 Hb_005203_010 Hb_005203_010 Hb_081448_010--Hb_005203_010 Hb_017417_020 Hb_017417_020 Hb_069232_010--Hb_017417_020 Hb_069232_010--Hb_000703_320 Hb_000270_010 Hb_000270_010 Hb_069232_010--Hb_000270_010 Hb_000331_690 Hb_000331_690 Hb_069232_010--Hb_000331_690 Hb_069232_010--Hb_005203_010 Hb_001021_140--Hb_031862_090 Hb_001021_140--Hb_005081_080 Hb_001021_140--Hb_000703_320 Hb_000077_470 Hb_000077_470 Hb_001021_140--Hb_000077_470 Hb_004341_010 Hb_004341_010 Hb_001021_140--Hb_004341_010 Hb_000431_180 Hb_000431_180 Hb_000703_320--Hb_000431_180 Hb_005380_030 Hb_005380_030 Hb_000703_320--Hb_005380_030 Hb_135811_060 Hb_135811_060 Hb_000703_320--Hb_135811_060 Hb_001487_020 Hb_001487_020 Hb_005081_080--Hb_001487_020 Hb_046117_050 Hb_046117_050 Hb_005081_080--Hb_046117_050 Hb_000170_230 Hb_000170_230 Hb_005081_080--Hb_000170_230 Hb_005081_080--Hb_069232_010 Hb_031862_090--Hb_005203_010 Hb_002282_030 Hb_002282_030 Hb_031862_090--Hb_002282_030 Hb_000891_060 Hb_000891_060 Hb_031862_090--Hb_000891_060 Hb_000616_060 Hb_000616_060 Hb_031862_090--Hb_000616_060 Hb_027445_080 Hb_027445_080 Hb_031862_090--Hb_027445_080 Hb_000575_010 Hb_000575_010 Hb_031862_090--Hb_000575_010 Hb_005203_010--Hb_027445_080 Hb_005203_010--Hb_002282_030 Hb_005203_010--Hb_000891_060 Hb_005203_010--Hb_000616_060 Hb_005203_010--Hb_000575_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0781679 0 0.0287649 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.039064 0

CAGE analysis