Hb_002003_020

Information

Type -
Description -
Location Contig2003: 65167-66895
Sequence    

Annotation

kegg
ID pop:POPTR_0014s17340g
description POPTRDRAFT_807713; putative glucosyltransferase family protein
nr
ID XP_012084448.1
description PREDICTED: UDP-glycosyltransferase 74F1-like [Jatropha curcas]
swissprot
ID Q6X1C0
description Crocetin glucosyltransferase 2 OS=Crocus sativus GN=GLT2 PE=1 SV=1
trembl
ID A0A067LLH7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15064 PE=3 SV=1
Gene Ontology
ID GO:0016758
description udp-glycosyltransferase 74e2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_20283: 65549-65857 , PASA_asmbl_20284: 66641-66958
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002003_020 0.0 - - PREDICTED: UDP-glycosyltransferase 74F1-like [Jatropha curcas]
2 Hb_017866_020 0.0847938105 transcription factor TF Family: WRKY WRKY transcription factor 40 [Jatropha curcas]
3 Hb_019229_020 0.095632685 - - Metalloendoproteinase 1 precursor, putative [Ricinus communis]
4 Hb_004136_050 0.1049808611 - - -
5 Hb_000077_460 0.1052544578 - - -
6 Hb_001638_110 0.1075118741 - - conserved hypothetical protein [Ricinus communis]
7 Hb_001283_010 0.1079508694 transcription factor TF Family: LOB LOB domain-containing protein 15 [Populus tremula x Populus tremuloides]
8 Hb_002716_080 0.110407556 - - PREDICTED: uncharacterized protein At4g00950 [Jatropha curcas]
9 Hb_126077_020 0.1134247645 - - Kinase family protein with leucine-rich repeat domain [Theobroma cacao]
10 Hb_000141_220 0.1156516309 - - PREDICTED: 14 kDa proline-rich protein DC2.15-like [Gossypium raimondii]
11 Hb_000616_050 0.1191533364 - - PREDICTED: uncharacterized protein LOC105639906 [Jatropha curcas]
12 Hb_001157_150 0.1193036344 - - PREDICTED: transmembrane protein 45A-like [Jatropha curcas]
13 Hb_000649_030 0.1225618856 - - scab resistance family protein [Populus trichocarpa]
14 Hb_002671_110 0.1230505532 - - PREDICTED: remorin-like [Jatropha curcas]
15 Hb_000000_060 0.1257057604 - - PREDICTED: wall-associated receptor kinase-like 14 [Jatropha curcas]
16 Hb_186298_010 0.1267274822 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
17 Hb_005663_050 0.1275942321 - - amino acid transporter, putative [Ricinus communis]
18 Hb_022998_010 0.1296386105 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
19 Hb_003119_070 0.1298531402 - - Phytosulfokine receptor precursor, putative [Ricinus communis]
20 Hb_003556_060 0.1315773748 - - -

Gene co-expression network

sample Hb_002003_020 Hb_002003_020 Hb_017866_020 Hb_017866_020 Hb_002003_020--Hb_017866_020 Hb_019229_020 Hb_019229_020 Hb_002003_020--Hb_019229_020 Hb_004136_050 Hb_004136_050 Hb_002003_020--Hb_004136_050 Hb_000077_460 Hb_000077_460 Hb_002003_020--Hb_000077_460 Hb_001638_110 Hb_001638_110 Hb_002003_020--Hb_001638_110 Hb_001283_010 Hb_001283_010 Hb_002003_020--Hb_001283_010 Hb_017866_020--Hb_000077_460 Hb_013914_020 Hb_013914_020 Hb_017866_020--Hb_013914_020 Hb_000045_180 Hb_000045_180 Hb_017866_020--Hb_000045_180 Hb_002007_140 Hb_002007_140 Hb_017866_020--Hb_002007_140 Hb_017866_020--Hb_001283_010 Hb_019229_020--Hb_001638_110 Hb_000616_050 Hb_000616_050 Hb_019229_020--Hb_000616_050 Hb_001104_280 Hb_001104_280 Hb_019229_020--Hb_001104_280 Hb_000649_030 Hb_000649_030 Hb_019229_020--Hb_000649_030 Hb_000000_060 Hb_000000_060 Hb_019229_020--Hb_000000_060 Hb_000237_150 Hb_000237_150 Hb_019229_020--Hb_000237_150 Hb_004136_050--Hb_001283_010 Hb_001863_460 Hb_001863_460 Hb_004136_050--Hb_001863_460 Hb_004136_050--Hb_017866_020 Hb_005663_050 Hb_005663_050 Hb_004136_050--Hb_005663_050 Hb_000057_010 Hb_000057_010 Hb_004136_050--Hb_000057_010 Hb_028207_030 Hb_028207_030 Hb_000077_460--Hb_028207_030 Hb_000077_460--Hb_000045_180 Hb_000077_460--Hb_001283_010 Hb_000077_460--Hb_013914_020 Hb_000238_060 Hb_000238_060 Hb_001638_110--Hb_000238_060 Hb_005228_170 Hb_005228_170 Hb_001638_110--Hb_005228_170 Hb_002671_110 Hb_002671_110 Hb_001638_110--Hb_002671_110 Hb_000852_050 Hb_000852_050 Hb_001638_110--Hb_000852_050 Hb_001638_110--Hb_000649_030 Hb_031954_010 Hb_031954_010 Hb_001283_010--Hb_031954_010 Hb_004341_010 Hb_004341_010 Hb_001283_010--Hb_004341_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0157267 3.46488 0.172002 1.21507 0.0253625 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 4.73788 0.0475663

CAGE analysis