Hb_005147_020

Information

Type -
Description -
Location Contig5147: 16229-16747
Sequence    

Annotation

kegg
ID tcc:TCM_006157
description hypothetical protein
nr
ID XP_012066683.1
description PREDICTED: uncharacterized protein LOC105629671 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L1Z2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00249 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005147_020 0.0 - - PREDICTED: uncharacterized protein LOC105629671 [Jatropha curcas]
2 Hb_000101_140 0.1028772868 - - amino acid transporter, putative [Ricinus communis]
3 Hb_000431_180 0.1059598238 - - PREDICTED: peroxidase 55 [Jatropha curcas]
4 Hb_002110_210 0.1062104154 - - purine transporter, putative [Ricinus communis]
5 Hb_002241_020 0.1227651295 - - PREDICTED: salicylic acid-binding protein 2-like [Jatropha curcas]
6 Hb_024857_010 0.1242199943 - - glutaredoxin 2.1 [Hevea brasiliensis]
7 Hb_000656_370 0.1246700003 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
8 Hb_000152_250 0.1259553758 - - PREDICTED: uncharacterized protein LOC105648569 [Jatropha curcas]
9 Hb_000521_210 0.1277911693 transcription factor TF Family: HB homeobox protein, putative [Ricinus communis]
10 Hb_000127_070 0.1279648346 - - PREDICTED: peroxidase 12-like [Jatropha curcas]
11 Hb_002735_010 0.1285246758 - - PREDICTED: CLAVATA3/ESR (CLE)-related protein 44 [Prunus mume]
12 Hb_002248_090 0.1290706844 - - metallothionein 3-like protein [Hevea brasiliensis]
13 Hb_015473_010 0.1303896981 - - PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]
14 Hb_005380_030 0.1309138134 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase B120 isoform X2 [Jatropha curcas]
15 Hb_002239_030 0.1355424663 transcription factor TF Family: ARF PREDICTED: auxin response factor 4 [Jatropha curcas]
16 Hb_000723_060 0.1392284758 - - PREDICTED: uncharacterized protein LOC105642243 [Jatropha curcas]
17 Hb_017661_020 0.1395804768 - - hypothetical protein JCGZ_11176 [Jatropha curcas]
18 Hb_000922_290 0.1396946175 - - PREDICTED: probable boron transporter 2 [Jatropha curcas]
19 Hb_002968_010 0.1404596183 - - PREDICTED: pectinesterase [Jatropha curcas]
20 Hb_000703_320 0.1429492408 - - receptor-kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_005147_020 Hb_005147_020 Hb_000101_140 Hb_000101_140 Hb_005147_020--Hb_000101_140 Hb_000431_180 Hb_000431_180 Hb_005147_020--Hb_000431_180 Hb_002110_210 Hb_002110_210 Hb_005147_020--Hb_002110_210 Hb_002241_020 Hb_002241_020 Hb_005147_020--Hb_002241_020 Hb_024857_010 Hb_024857_010 Hb_005147_020--Hb_024857_010 Hb_000656_370 Hb_000656_370 Hb_005147_020--Hb_000656_370 Hb_000101_140--Hb_000656_370 Hb_000723_060 Hb_000723_060 Hb_000101_140--Hb_000723_060 Hb_002239_030 Hb_002239_030 Hb_000101_140--Hb_002239_030 Hb_002968_010 Hb_002968_010 Hb_000101_140--Hb_002968_010 Hb_006615_180 Hb_006615_180 Hb_000101_140--Hb_006615_180 Hb_000521_210 Hb_000521_210 Hb_000101_140--Hb_000521_210 Hb_000703_320 Hb_000703_320 Hb_000431_180--Hb_000703_320 Hb_000270_010 Hb_000270_010 Hb_000431_180--Hb_000270_010 Hb_131591_010 Hb_131591_010 Hb_000431_180--Hb_131591_010 Hb_017661_020 Hb_017661_020 Hb_000431_180--Hb_017661_020 Hb_069232_010 Hb_069232_010 Hb_000431_180--Hb_069232_010 Hb_002110_210--Hb_002241_020 Hb_002735_010 Hb_002735_010 Hb_002110_210--Hb_002735_010 Hb_004218_230 Hb_004218_230 Hb_002110_210--Hb_004218_230 Hb_015473_010 Hb_015473_010 Hb_002110_210--Hb_015473_010 Hb_000127_070 Hb_000127_070 Hb_002110_210--Hb_000127_070 Hb_002241_020--Hb_002735_010 Hb_000987_080 Hb_000987_080 Hb_002241_020--Hb_000987_080 Hb_005380_030 Hb_005380_030 Hb_002241_020--Hb_005380_030 Hb_002241_020--Hb_015473_010 Hb_002236_020 Hb_002236_020 Hb_024857_010--Hb_002236_020 Hb_087468_010 Hb_087468_010 Hb_024857_010--Hb_087468_010 Hb_024857_010--Hb_000656_370 Hb_000252_190 Hb_000252_190 Hb_024857_010--Hb_000252_190 Hb_024857_010--Hb_002239_030 Hb_024857_010--Hb_000101_140 Hb_000656_370--Hb_002968_010 Hb_000656_370--Hb_002236_020 Hb_145139_010 Hb_145139_010 Hb_000656_370--Hb_145139_010 Hb_004122_020 Hb_004122_020 Hb_000656_370--Hb_004122_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 13.4877 0.72486 7.44144 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 3.82445 0.374081

CAGE analysis