Hb_002241_020

Information

Type -
Description -
Location Contig2241: 31391-32439
Sequence    

Annotation

kegg
ID rcu:RCOM_0602630
description Polyneuridine-aldehyde esterase precursor, putative (EC:3.1.1.78)
nr
ID XP_012079156.1
description PREDICTED: salicylic acid-binding protein 2-like [Jatropha curcas]
swissprot
ID Q6RYA0
description Salicylic acid-binding protein 2 OS=Nicotiana tabacum GN=SABP2 PE=1 SV=1
trembl
ID A0A067KA58
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12329 PE=4 SV=1
Gene Ontology
ID GO:0050529
description salicylic acid-binding protein 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002241_020 0.0 - - PREDICTED: salicylic acid-binding protein 2-like [Jatropha curcas]
2 Hb_002110_210 0.0664066129 - - purine transporter, putative [Ricinus communis]
3 Hb_002735_010 0.1147105994 - - PREDICTED: CLAVATA3/ESR (CLE)-related protein 44 [Prunus mume]
4 Hb_000987_080 0.1176893729 - - light-inducible protein atls1, putative [Ricinus communis]
5 Hb_005380_030 0.1221798636 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase B120 isoform X2 [Jatropha curcas]
6 Hb_005147_020 0.1227651295 - - PREDICTED: uncharacterized protein LOC105629671 [Jatropha curcas]
7 Hb_015473_010 0.1245436006 - - PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]
8 Hb_004218_230 0.1299899702 - - Peptide transporter, putative [Ricinus communis]
9 Hb_000504_050 0.1337359025 transcription factor TF Family: LOB LOB domain protein 25 [Populus trichocarpa]
10 Hb_000316_080 0.1404115226 - - ENTH/VHS family protein [Theobroma cacao]
11 Hb_000127_070 0.1439379662 - - PREDICTED: peroxidase 12-like [Jatropha curcas]
12 Hb_005203_010 0.1507315427 - - PREDICTED: probable nucleolar protein 5-1 [Jatropha curcas]
13 Hb_000703_320 0.1543140336 - - receptor-kinase, putative [Ricinus communis]
14 Hb_000152_250 0.1553322737 - - PREDICTED: uncharacterized protein LOC105648569 [Jatropha curcas]
15 Hb_013691_040 0.1554315373 - - hypothetical protein B456_001G045900 [Gossypium raimondii]
16 Hb_000922_290 0.1571932383 - - PREDICTED: probable boron transporter 2 [Jatropha curcas]
17 Hb_027445_080 0.1597194468 transcription factor TF Family: LOB LOB domain protein 25 [Populus trichocarpa]
18 Hb_001976_120 0.162563664 - - PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Jatropha curcas]
19 Hb_017661_020 0.1628929991 - - hypothetical protein JCGZ_11176 [Jatropha curcas]
20 Hb_140848_010 0.1663088504 - - hypothetical protein POPTR_0014s17480g [Populus trichocarpa]

Gene co-expression network

sample Hb_002241_020 Hb_002241_020 Hb_002110_210 Hb_002110_210 Hb_002241_020--Hb_002110_210 Hb_002735_010 Hb_002735_010 Hb_002241_020--Hb_002735_010 Hb_000987_080 Hb_000987_080 Hb_002241_020--Hb_000987_080 Hb_005380_030 Hb_005380_030 Hb_002241_020--Hb_005380_030 Hb_005147_020 Hb_005147_020 Hb_002241_020--Hb_005147_020 Hb_015473_010 Hb_015473_010 Hb_002241_020--Hb_015473_010 Hb_002110_210--Hb_002735_010 Hb_004218_230 Hb_004218_230 Hb_002110_210--Hb_004218_230 Hb_002110_210--Hb_015473_010 Hb_002110_210--Hb_005147_020 Hb_000127_070 Hb_000127_070 Hb_002110_210--Hb_000127_070 Hb_000152_250 Hb_000152_250 Hb_002735_010--Hb_000152_250 Hb_002735_010--Hb_015473_010 Hb_140848_010 Hb_140848_010 Hb_002735_010--Hb_140848_010 Hb_002735_010--Hb_000127_070 Hb_000922_290 Hb_000922_290 Hb_000987_080--Hb_000922_290 Hb_000316_080 Hb_000316_080 Hb_000987_080--Hb_000316_080 Hb_005892_010 Hb_005892_010 Hb_000987_080--Hb_005892_010 Hb_013691_040 Hb_013691_040 Hb_000987_080--Hb_013691_040 Hb_000987_080--Hb_002110_210 Hb_000703_320 Hb_000703_320 Hb_005380_030--Hb_000703_320 Hb_005380_030--Hb_002110_210 Hb_005380_030--Hb_005147_020 Hb_002248_090 Hb_002248_090 Hb_005380_030--Hb_002248_090 Hb_005380_030--Hb_002735_010 Hb_000101_140 Hb_000101_140 Hb_005147_020--Hb_000101_140 Hb_000431_180 Hb_000431_180 Hb_005147_020--Hb_000431_180 Hb_024857_010 Hb_024857_010 Hb_005147_020--Hb_024857_010 Hb_000656_370 Hb_000656_370 Hb_005147_020--Hb_000656_370 Hb_015473_010--Hb_000152_250 Hb_000521_210 Hb_000521_210 Hb_015473_010--Hb_000521_210 Hb_003439_090 Hb_003439_090 Hb_015473_010--Hb_003439_090 Hb_001823_070 Hb_001823_070 Hb_015473_010--Hb_001823_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0571534 18.0666 0.0795111 11.9692 0.0951348 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 6.70266 1.02149

CAGE analysis