Hb_018133_080

Information

Type -
Description -
Location Contig18133: 56737-57069
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_018133_080 0.0 - - -
2 Hb_007595_010 0.191330423 - - Photosystem II reaction center protein K [Medicago truncatula]
3 Hb_000291_070 0.2034347867 - - conserved hypothetical protein [Ricinus communis]
4 Hb_025193_010 0.2089827082 - - PREDICTED: indole-3-acetic acid-amido synthetase GH3.17-like isoform X1 [Jatropha curcas]
5 Hb_015934_050 0.20945628 - - PREDICTED: transcription factor PAR2-like [Jatropha curcas]
6 Hb_162472_010 0.2107600273 - - conserved hypothetical protein [Ricinus communis]
7 Hb_002783_280 0.2133812707 - - PREDICTED: WEB family protein At1g75720 [Jatropha curcas]
8 Hb_002276_080 0.21982541 - - Protein bem46, putative [Ricinus communis]
9 Hb_006002_050 0.2213048578 - - PREDICTED: uncharacterized protein LOC105638083 [Jatropha curcas]
10 Hb_000413_120 0.2218849772 - - PREDICTED: BTB/POZ domain-containing protein At3g22104-like [Jatropha curcas]
11 Hb_033720_030 0.2230795244 - - KDEL motif-containing protein 1 precursor, putative [Ricinus communis]
12 Hb_002067_070 0.2250332952 - - hypothetical protein JCGZ_19254 [Jatropha curcas]
13 Hb_000922_400 0.2255051674 - - PREDICTED: uncharacterized protein LOC105640363 [Jatropha curcas]
14 Hb_000357_140 0.2256598561 - - hypothetical protein JCGZ_15089 [Jatropha curcas]
15 Hb_004254_060 0.2268174524 - - PREDICTED: uncharacterized protein LOC105650679 [Jatropha curcas]
16 Hb_000140_320 0.228295824 - - delta-8 sphingolipid desaturase [Vernicia fordii]
17 Hb_017908_010 0.2283145609 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000398_070 0.2284165222 - - hypothetical protein VITISV_011880 [Vitis vinifera]
19 Hb_000003_210 0.2289224344 - - PREDICTED: GEM-like protein 4 [Jatropha curcas]
20 Hb_003583_010 0.23043998 - - PREDICTED: patatin-like protein 6 [Jatropha curcas]

Gene co-expression network

sample Hb_018133_080 Hb_018133_080 Hb_007595_010 Hb_007595_010 Hb_018133_080--Hb_007595_010 Hb_000291_070 Hb_000291_070 Hb_018133_080--Hb_000291_070 Hb_025193_010 Hb_025193_010 Hb_018133_080--Hb_025193_010 Hb_015934_050 Hb_015934_050 Hb_018133_080--Hb_015934_050 Hb_162472_010 Hb_162472_010 Hb_018133_080--Hb_162472_010 Hb_002783_280 Hb_002783_280 Hb_018133_080--Hb_002783_280 Hb_000922_400 Hb_000922_400 Hb_007595_010--Hb_000922_400 Hb_013749_040 Hb_013749_040 Hb_007595_010--Hb_013749_040 Hb_007595_010--Hb_002783_280 Hb_000345_550 Hb_000345_550 Hb_007595_010--Hb_000345_550 Hb_005784_010 Hb_005784_010 Hb_007595_010--Hb_005784_010 Hb_002471_130 Hb_002471_130 Hb_007595_010--Hb_002471_130 Hb_003750_090 Hb_003750_090 Hb_000291_070--Hb_003750_090 Hb_004254_060 Hb_004254_060 Hb_000291_070--Hb_004254_060 Hb_000120_930 Hb_000120_930 Hb_000291_070--Hb_000120_930 Hb_000120_630 Hb_000120_630 Hb_000291_070--Hb_000120_630 Hb_000107_360 Hb_000107_360 Hb_000291_070--Hb_000107_360 Hb_001673_090 Hb_001673_090 Hb_025193_010--Hb_001673_090 Hb_002263_050 Hb_002263_050 Hb_025193_010--Hb_002263_050 Hb_009662_040 Hb_009662_040 Hb_025193_010--Hb_009662_040 Hb_004933_010 Hb_004933_010 Hb_025193_010--Hb_004933_010 Hb_000487_130 Hb_000487_130 Hb_025193_010--Hb_000487_130 Hb_000622_230 Hb_000622_230 Hb_025193_010--Hb_000622_230 Hb_000815_050 Hb_000815_050 Hb_015934_050--Hb_000815_050 Hb_000140_320 Hb_000140_320 Hb_015934_050--Hb_000140_320 Hb_002740_140 Hb_002740_140 Hb_015934_050--Hb_002740_140 Hb_002311_030 Hb_002311_030 Hb_015934_050--Hb_002311_030 Hb_023582_030 Hb_023582_030 Hb_015934_050--Hb_023582_030 Hb_000742_070 Hb_000742_070 Hb_015934_050--Hb_000742_070 Hb_001025_130 Hb_001025_130 Hb_162472_010--Hb_001025_130 Hb_001975_110 Hb_001975_110 Hb_162472_010--Hb_001975_110 Hb_002276_080 Hb_002276_080 Hb_162472_010--Hb_002276_080 Hb_006483_070 Hb_006483_070 Hb_162472_010--Hb_006483_070 Hb_001709_120 Hb_001709_120 Hb_162472_010--Hb_001709_120 Hb_000005_290 Hb_000005_290 Hb_162472_010--Hb_000005_290 Hb_000317_380 Hb_000317_380 Hb_002783_280--Hb_000317_380 Hb_006002_050 Hb_006002_050 Hb_002783_280--Hb_006002_050 Hb_007122_020 Hb_007122_020 Hb_002783_280--Hb_007122_020 Hb_002783_280--Hb_000140_320 Hb_002783_280--Hb_162472_010 Hb_000413_120 Hb_000413_120 Hb_002783_280--Hb_000413_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 2.85603 6.77095 0.115789 0.701824
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.229419 0.343014 0.103577 1.87175

CAGE analysis