Hb_000345_550

Information

Type -
Description -
Location Contig345: 444588-445088
Sequence    

Annotation

kegg
ID rcu:RCOM_1314880
description hypothetical protein
nr
ID XP_012066443.1
description PREDICTED: uncharacterized protein LOC105629456 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LDW9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23625 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000345_550 0.0 - - PREDICTED: uncharacterized protein LOC105629456 [Jatropha curcas]
2 Hb_005784_010 0.0799217715 - - PREDICTED: uncharacterized protein LOC105645175 [Jatropha curcas]
3 Hb_009785_030 0.086661905 transcription factor TF Family: NAC PREDICTED: NAC transcription factor ONAC010 [Jatropha curcas]
4 Hb_001951_080 0.088279482 - - O-acetyltransferase, putative [Ricinus communis]
5 Hb_009783_010 0.0901915824 - - PREDICTED: sulfated surface glycoprotein 185-like [Populus euphratica]
6 Hb_009023_010 0.0936991984 - - glycosyl hydrolase family 31 family protein [Populus trichocarpa]
7 Hb_007904_280 0.0955835147 - - PREDICTED: uncharacterized protein LOC105644987 [Jatropha curcas]
8 Hb_001486_280 0.0971635648 - - hypothetical protein RCOM_1321910 [Ricinus communis]
9 Hb_000270_380 0.0989336757 - - PREDICTED: microtubule-associated protein TORTIFOLIA1 [Jatropha curcas]
10 Hb_002485_010 0.106615476 - - PREDICTED: extensin [Jatropha curcas]
11 Hb_012098_160 0.1080951318 - - PREDICTED: pathogenesis-related protein 5-like [Jatropha curcas]
12 Hb_001159_230 0.1112320183 - - Kinesin heavy chain, putative [Ricinus communis]
13 Hb_004223_060 0.1121562552 - - PREDICTED: WEB family protein At1g75720 [Jatropha curcas]
14 Hb_012484_050 0.1137840275 - - PREDICTED: kinesin KP1 [Jatropha curcas]
15 Hb_000922_400 0.1138550497 - - PREDICTED: uncharacterized protein LOC105640363 [Jatropha curcas]
16 Hb_000878_050 0.118082002 - - PREDICTED: fasciclin-like arabinogalactan protein 17 [Jatropha curcas]
17 Hb_002874_200 0.1182055911 - - PREDICTED: uncharacterized protein LOC105109832 [Populus euphratica]
18 Hb_000261_070 0.1193064347 - - PREDICTED: F-box/kelch-repeat protein At3g06240-like [Jatropha curcas]
19 Hb_002471_130 0.1212602456 - - PREDICTED: probable transmembrane ascorbate ferrireductase 3 [Jatropha curcas]
20 Hb_000077_250 0.12216028 - - hypothetical protein JCGZ_25802 [Jatropha curcas]

Gene co-expression network

sample Hb_000345_550 Hb_000345_550 Hb_005784_010 Hb_005784_010 Hb_000345_550--Hb_005784_010 Hb_009785_030 Hb_009785_030 Hb_000345_550--Hb_009785_030 Hb_001951_080 Hb_001951_080 Hb_000345_550--Hb_001951_080 Hb_009783_010 Hb_009783_010 Hb_000345_550--Hb_009783_010 Hb_009023_010 Hb_009023_010 Hb_000345_550--Hb_009023_010 Hb_007904_280 Hb_007904_280 Hb_000345_550--Hb_007904_280 Hb_005784_010--Hb_001951_080 Hb_005784_010--Hb_007904_280 Hb_004223_060 Hb_004223_060 Hb_005784_010--Hb_004223_060 Hb_001819_020 Hb_001819_020 Hb_005784_010--Hb_001819_020 Hb_005784_010--Hb_009783_010 Hb_009785_030--Hb_009783_010 Hb_000012_350 Hb_000012_350 Hb_009785_030--Hb_000012_350 Hb_002874_200 Hb_002874_200 Hb_009785_030--Hb_002874_200 Hb_009785_030--Hb_007904_280 Hb_012132_050 Hb_012132_050 Hb_009785_030--Hb_012132_050 Hb_012484_050 Hb_012484_050 Hb_001951_080--Hb_012484_050 Hb_001486_280 Hb_001486_280 Hb_001951_080--Hb_001486_280 Hb_003097_160 Hb_003097_160 Hb_001951_080--Hb_003097_160 Hb_003125_210 Hb_003125_210 Hb_001951_080--Hb_003125_210 Hb_009783_010--Hb_007904_280 Hb_001898_040 Hb_001898_040 Hb_009783_010--Hb_001898_040 Hb_009783_010--Hb_012132_050 Hb_001136_040 Hb_001136_040 Hb_009783_010--Hb_001136_040 Hb_001136_160 Hb_001136_160 Hb_009783_010--Hb_001136_160 Hb_007185_050 Hb_007185_050 Hb_009783_010--Hb_007185_050 Hb_000270_380 Hb_000270_380 Hb_009023_010--Hb_000270_380 Hb_015561_010 Hb_015561_010 Hb_009023_010--Hb_015561_010 Hb_005762_010 Hb_005762_010 Hb_009023_010--Hb_005762_010 Hb_002062_010 Hb_002062_010 Hb_009023_010--Hb_002062_010 Hb_012098_160 Hb_012098_160 Hb_009023_010--Hb_012098_160 Hb_001512_130 Hb_001512_130 Hb_009023_010--Hb_001512_130 Hb_007904_280--Hb_012132_050 Hb_007904_280--Hb_004223_060 Hb_000878_050 Hb_000878_050 Hb_007904_280--Hb_000878_050 Hb_007904_280--Hb_001136_160 Hb_007904_280--Hb_000012_350
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.43358 10.0921 35.7568 86.8738 1.99324 1.59373
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.712458 2.05302 45.7981

CAGE analysis