Hb_000291_070

Information

Type -
Description -
Location Contig291: 60560-61159
Sequence    

Annotation

kegg
ID rcu:RCOM_1032910
description hypothetical protein
nr
ID XP_002513839.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RJC0
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1032910 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000291_070 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_003750_090 0.1847890789 - - BnaC02g34020D [Brassica napus]
3 Hb_004254_060 0.2008674079 - - PREDICTED: uncharacterized protein LOC105650679 [Jatropha curcas]
4 Hb_018133_080 0.2034347867 - - -
5 Hb_000120_930 0.2088715395 - - PREDICTED: G2/mitotic-specific cyclin-2-like isoform X2 [Jatropha curcas]
6 Hb_000120_630 0.2099598314 - - PREDICTED: glutamate receptor 3.6-like [Jatropha curcas]
7 Hb_000107_360 0.2122285189 - - PREDICTED: xylem cysteine proteinase 1 [Jatropha curcas]
8 Hb_000792_100 0.2126906494 - - PREDICTED: uncharacterized protein OsI_027940-like [Jatropha curcas]
9 Hb_002811_070 0.2149071934 - - Cytidine/deoxycytidylate deaminase family protein isoform 1 [Theobroma cacao]
10 Hb_017908_010 0.216242027 - - conserved hypothetical protein [Ricinus communis]
11 Hb_011501_010 0.2174778015 - - PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5-like [Jatropha curcas]
12 Hb_123713_010 0.2185727813 - - o-methyltransferase, putative [Ricinus communis]
13 Hb_010889_010 0.2194517998 - - PREDICTED: myosin-12 [Jatropha curcas]
14 Hb_000028_080 0.2196601025 - - PREDICTED: uncharacterized protein At3g17950 [Jatropha curcas]
15 Hb_000363_390 0.2197932111 - - Benzoate carboxyl methyltransferase, putative [Ricinus communis]
16 Hb_033720_030 0.221940108 - - KDEL motif-containing protein 1 precursor, putative [Ricinus communis]
17 Hb_002811_220 0.2221749297 transcription factor TF Family: Trihelix transcription factor, putative [Ricinus communis]
18 Hb_001662_120 0.2236007522 - - PREDICTED: ammonium transporter 3 member 1-like [Jatropha curcas]
19 Hb_000107_280 0.2237583344 - - serine/threonine protein kinase, putative [Ricinus communis]
20 Hb_059226_010 0.2255652594 - - PREDICTED: kinesin-like protein NACK1 [Jatropha curcas]

Gene co-expression network

sample Hb_000291_070 Hb_000291_070 Hb_003750_090 Hb_003750_090 Hb_000291_070--Hb_003750_090 Hb_004254_060 Hb_004254_060 Hb_000291_070--Hb_004254_060 Hb_018133_080 Hb_018133_080 Hb_000291_070--Hb_018133_080 Hb_000120_930 Hb_000120_930 Hb_000291_070--Hb_000120_930 Hb_000120_630 Hb_000120_630 Hb_000291_070--Hb_000120_630 Hb_000107_360 Hb_000107_360 Hb_000291_070--Hb_000107_360 Hb_000187_050 Hb_000187_050 Hb_003750_090--Hb_000187_050 Hb_000445_260 Hb_000445_260 Hb_003750_090--Hb_000445_260 Hb_011861_130 Hb_011861_130 Hb_003750_090--Hb_011861_130 Hb_002686_320 Hb_002686_320 Hb_003750_090--Hb_002686_320 Hb_001971_040 Hb_001971_040 Hb_003750_090--Hb_001971_040 Hb_009113_020 Hb_009113_020 Hb_003750_090--Hb_009113_020 Hb_004254_060--Hb_000120_930 Hb_011501_010 Hb_011501_010 Hb_004254_060--Hb_011501_010 Hb_016333_010 Hb_016333_010 Hb_004254_060--Hb_016333_010 Hb_000497_250 Hb_000497_250 Hb_004254_060--Hb_000497_250 Hb_001431_090 Hb_001431_090 Hb_004254_060--Hb_001431_090 Hb_000676_360 Hb_000676_360 Hb_004254_060--Hb_000676_360 Hb_007595_010 Hb_007595_010 Hb_018133_080--Hb_007595_010 Hb_025193_010 Hb_025193_010 Hb_018133_080--Hb_025193_010 Hb_015934_050 Hb_015934_050 Hb_018133_080--Hb_015934_050 Hb_162472_010 Hb_162472_010 Hb_018133_080--Hb_162472_010 Hb_002783_280 Hb_002783_280 Hb_018133_080--Hb_002783_280 Hb_002267_060 Hb_002267_060 Hb_000120_930--Hb_002267_060 Hb_000321_170 Hb_000321_170 Hb_000120_930--Hb_000321_170 Hb_000120_930--Hb_003750_090 Hb_002045_210 Hb_002045_210 Hb_000120_930--Hb_002045_210 Hb_000120_930--Hb_001431_090 Hb_000120_630--Hb_004254_060 Hb_145745_040 Hb_145745_040 Hb_000120_630--Hb_145745_040 Hb_001140_190 Hb_001140_190 Hb_000120_630--Hb_001140_190 Hb_000958_160 Hb_000958_160 Hb_000120_630--Hb_000958_160 Hb_002811_220 Hb_002811_220 Hb_000120_630--Hb_002811_220 Hb_000352_010 Hb_000352_010 Hb_000120_630--Hb_000352_010 Hb_000072_230 Hb_000072_230 Hb_000107_360--Hb_000072_230 Hb_000964_050 Hb_000964_050 Hb_000107_360--Hb_000964_050 Hb_006198_100 Hb_006198_100 Hb_000107_360--Hb_006198_100 Hb_002818_060 Hb_002818_060 Hb_000107_360--Hb_002818_060 Hb_000417_090 Hb_000417_090 Hb_000107_360--Hb_000417_090 Hb_005496_040 Hb_005496_040 Hb_000107_360--Hb_005496_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.165528 0 2.33938 3.09953 0 0.232768
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.079358 0.138795 0.0325444 0.46073

CAGE analysis