Hb_000964_050

Information

Type -
Description -
Location Contig964: 39317-41869
Sequence    

Annotation

kegg
ID rcu:RCOM_0403790
description hypothetical protein
nr
ID XP_012065557.1
description PREDICTED: uncharacterized protein LOC105628694 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L4W4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16754 PE=4 SV=1
Gene Ontology
ID GO:0044763
description PREDICTED: uncharacterized protein LOC105628694

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63848: 39362-42100
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000964_050 0.0 - - PREDICTED: uncharacterized protein LOC105628694 [Jatropha curcas]
2 Hb_000107_360 0.1085324561 - - PREDICTED: xylem cysteine proteinase 1 [Jatropha curcas]
3 Hb_000072_230 0.1091744067 - - hypothetical protein POPTR_0004s10790g [Populus trichocarpa]
4 Hb_001053_170 0.1140910532 - - PREDICTED: uncharacterized protein LOC105628694 [Jatropha curcas]
5 Hb_002045_160 0.1235023342 - - PREDICTED: DJ-1 protein homolog E-like [Jatropha curcas]
6 Hb_003109_010 0.1293207987 - - PREDICTED: kinesin-like protein KIN12B [Jatropha curcas]
7 Hb_001511_210 0.1304343592 - - PREDICTED: protein ESKIMO 1-like [Jatropha curcas]
8 Hb_011671_050 0.1319513402 - - PREDICTED: F-box protein At5g07670 [Jatropha curcas]
9 Hb_003020_190 0.133387635 - - PREDICTED: methylsterol monooxygenase 2-2 [Jatropha curcas]
10 Hb_001140_190 0.1338909471 - - PREDICTED: A-kinase anchor protein 9 [Jatropha curcas]
11 Hb_000031_240 0.1368641171 - - transferase, transferring glycosyl groups, putative [Ricinus communis]
12 Hb_003813_090 0.1407780606 - - PREDICTED: uncharacterized protein LOC105638743 [Jatropha curcas]
13 Hb_004115_010 0.1418994558 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HDG11 [Jatropha curcas]
14 Hb_008053_030 0.1421655556 - - Rop guanine nucleotide exchange factor, putative [Ricinus communis]
15 Hb_003228_050 0.1422325111 - - chromomethylase [Hevea brasiliensis]
16 Hb_000956_050 0.1425369476 transcription factor TF Family: bHLH PREDICTED: transcription factor SPATULA-like isoform X1 [Jatropha curcas]
17 Hb_002374_470 0.1426239906 - - PREDICTED: filament-like plant protein isoform X2 [Jatropha curcas]
18 Hb_002818_060 0.1433647332 - - zinc finger protein, putative [Ricinus communis]
19 Hb_001755_040 0.1437042159 - - PREDICTED: cyclin-A2-4-like isoform X1 [Jatropha curcas]
20 Hb_047659_010 0.1452435844 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000964_050 Hb_000964_050 Hb_000107_360 Hb_000107_360 Hb_000964_050--Hb_000107_360 Hb_000072_230 Hb_000072_230 Hb_000964_050--Hb_000072_230 Hb_001053_170 Hb_001053_170 Hb_000964_050--Hb_001053_170 Hb_002045_160 Hb_002045_160 Hb_000964_050--Hb_002045_160 Hb_003109_010 Hb_003109_010 Hb_000964_050--Hb_003109_010 Hb_001511_210 Hb_001511_210 Hb_000964_050--Hb_001511_210 Hb_000107_360--Hb_000072_230 Hb_006198_100 Hb_006198_100 Hb_000107_360--Hb_006198_100 Hb_002818_060 Hb_002818_060 Hb_000107_360--Hb_002818_060 Hb_000417_090 Hb_000417_090 Hb_000107_360--Hb_000417_090 Hb_005496_040 Hb_005496_040 Hb_000107_360--Hb_005496_040 Hb_000331_170 Hb_000331_170 Hb_000072_230--Hb_000331_170 Hb_000072_230--Hb_000417_090 Hb_000031_240 Hb_000031_240 Hb_000072_230--Hb_000031_240 Hb_011310_170 Hb_011310_170 Hb_000072_230--Hb_011310_170 Hb_001053_170--Hb_002045_160 Hb_001053_170--Hb_001511_210 Hb_002301_120 Hb_002301_120 Hb_001053_170--Hb_002301_120 Hb_011671_050 Hb_011671_050 Hb_001053_170--Hb_011671_050 Hb_005116_120 Hb_005116_120 Hb_001053_170--Hb_005116_120 Hb_001439_050 Hb_001439_050 Hb_001053_170--Hb_001439_050 Hb_000073_040 Hb_000073_040 Hb_002045_160--Hb_000073_040 Hb_000397_060 Hb_000397_060 Hb_002045_160--Hb_000397_060 Hb_001958_040 Hb_001958_040 Hb_002045_160--Hb_001958_040 Hb_072620_010 Hb_072620_010 Hb_002045_160--Hb_072620_010 Hb_000010_320 Hb_000010_320 Hb_002045_160--Hb_000010_320 Hb_033041_010 Hb_033041_010 Hb_003109_010--Hb_033041_010 Hb_007632_080 Hb_007632_080 Hb_003109_010--Hb_007632_080 Hb_002232_310 Hb_002232_310 Hb_003109_010--Hb_002232_310 Hb_001584_360 Hb_001584_360 Hb_003109_010--Hb_001584_360 Hb_101133_050 Hb_101133_050 Hb_003109_010--Hb_101133_050 Hb_007943_180 Hb_007943_180 Hb_003109_010--Hb_007943_180 Hb_001258_130 Hb_001258_130 Hb_001511_210--Hb_001258_130 Hb_001511_210--Hb_002301_120 Hb_002066_100 Hb_002066_100 Hb_001511_210--Hb_002066_100 Hb_016297_010 Hb_016297_010 Hb_001511_210--Hb_016297_010 Hb_000722_030 Hb_000722_030 Hb_001511_210--Hb_000722_030 Hb_002374_470 Hb_002374_470 Hb_001511_210--Hb_002374_470
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0981004 0.565345 17.0406 9.76915 0.0196756 0.285313
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.17946 0.494049 0.261405 0.835426 4.28774

CAGE analysis