Hb_002045_160

Information

Type -
Description -
Location Contig2045: 114144-115855
Sequence    

Annotation

kegg
ID tcc:TCM_004227
description Class I glutamine amidotransferase-like superfamily protein
nr
ID XP_012092132.1
description PREDICTED: DJ-1 protein homolog E-like [Jatropha curcas]
swissprot
ID Q9ZV19
description DJ-1 protein homolog E OS=Arabidopsis thaliana GN=DJ1E PE=1 SV=1
trembl
ID A0A067JMY3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21851 PE=4 SV=1
Gene Ontology
ID GO:0005737
description dj-1 protein homolog e-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_21042: 113884-115774 , PASA_asmbl_21043: 113884-115774
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002045_160 0.0 - - PREDICTED: DJ-1 protein homolog E-like [Jatropha curcas]
2 Hb_000073_040 0.0781667179 - - hypothetical protein POPTR_0003s21020g, partial [Populus trichocarpa]
3 Hb_001053_170 0.0838253998 - - PREDICTED: uncharacterized protein LOC105628694 [Jatropha curcas]
4 Hb_000397_060 0.0852990302 - - PREDICTED: uncharacterized protein LOC105641237 [Jatropha curcas]
5 Hb_001958_040 0.0920979886 - - PREDICTED: uncharacterized protein LOC105641237 [Jatropha curcas]
6 Hb_072620_010 0.092824106 - - PREDICTED: receptor-like protein kinase 2 [Cucumis melo]
7 Hb_000010_320 0.0980963369 - - PREDICTED: protein STICHEL-like 2 [Jatropha curcas]
8 Hb_000258_400 0.0991342649 transcription factor TF Family: bHLH transcription regulator, putative [Ricinus communis]
9 Hb_001856_190 0.1008240349 - - SP1L, putative [Ricinus communis]
10 Hb_000340_550 0.101119505 - - PREDICTED: rho GTPase-activating protein 2 [Jatropha curcas]
11 Hb_003777_260 0.1032038231 - - PREDICTED: uncharacterized protein LOC105640927 isoform X4 [Jatropha curcas]
12 Hb_002053_100 0.1047259683 - - actin binding protein, putative [Ricinus communis]
13 Hb_005288_090 0.1060211831 - - PREDICTED: uncharacterized protein LOC105647753 [Jatropha curcas]
14 Hb_001257_070 0.1067884172 - - PREDICTED: aspartic proteinase nepenthesin-1-like [Jatropha curcas]
15 Hb_001623_250 0.1070785683 - - PREDICTED: probable pectate lyase 8 [Jatropha curcas]
16 Hb_005116_120 0.107835811 - - PREDICTED: uncharacterized protein LOC105649997 isoform X2 [Jatropha curcas]
17 Hb_072952_010 0.1095372888 - - PREDICTED: GDSL esterase/lipase At5g18430-like [Populus euphratica]
18 Hb_001511_210 0.1111657869 - - PREDICTED: protein ESKIMO 1-like [Jatropha curcas]
19 Hb_001301_310 0.111544621 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001357_160 0.111602775 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_002045_160 Hb_002045_160 Hb_000073_040 Hb_000073_040 Hb_002045_160--Hb_000073_040 Hb_001053_170 Hb_001053_170 Hb_002045_160--Hb_001053_170 Hb_000397_060 Hb_000397_060 Hb_002045_160--Hb_000397_060 Hb_001958_040 Hb_001958_040 Hb_002045_160--Hb_001958_040 Hb_072620_010 Hb_072620_010 Hb_002045_160--Hb_072620_010 Hb_000010_320 Hb_000010_320 Hb_002045_160--Hb_000010_320 Hb_000073_040--Hb_001958_040 Hb_000073_040--Hb_000397_060 Hb_000258_400 Hb_000258_400 Hb_000073_040--Hb_000258_400 Hb_072952_010 Hb_072952_010 Hb_000073_040--Hb_072952_010 Hb_000073_040--Hb_072620_010 Hb_001511_210 Hb_001511_210 Hb_001053_170--Hb_001511_210 Hb_002301_120 Hb_002301_120 Hb_001053_170--Hb_002301_120 Hb_011671_050 Hb_011671_050 Hb_001053_170--Hb_011671_050 Hb_005116_120 Hb_005116_120 Hb_001053_170--Hb_005116_120 Hb_001439_050 Hb_001439_050 Hb_001053_170--Hb_001439_050 Hb_000397_060--Hb_001958_040 Hb_005357_140 Hb_005357_140 Hb_000397_060--Hb_005357_140 Hb_000397_060--Hb_072952_010 Hb_000397_060--Hb_000010_320 Hb_001301_310 Hb_001301_310 Hb_000397_060--Hb_001301_310 Hb_004007_050 Hb_004007_050 Hb_001958_040--Hb_004007_050 Hb_001958_040--Hb_001301_310 Hb_004128_150 Hb_004128_150 Hb_001958_040--Hb_004128_150 Hb_019516_010 Hb_019516_010 Hb_001958_040--Hb_019516_010 Hb_072620_010--Hb_000258_400 Hb_072620_010--Hb_072952_010 Hb_001257_070 Hb_001257_070 Hb_072620_010--Hb_001257_070 Hb_000671_020 Hb_000671_020 Hb_072620_010--Hb_000671_020 Hb_074240_030 Hb_074240_030 Hb_000010_320--Hb_074240_030 Hb_158845_010 Hb_158845_010 Hb_000010_320--Hb_158845_010 Hb_059832_010 Hb_059832_010 Hb_000010_320--Hb_059832_010 Hb_015299_040 Hb_015299_040 Hb_000010_320--Hb_015299_040 Hb_001856_190 Hb_001856_190 Hb_000010_320--Hb_001856_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.996001 4.90241 426.327 194.241 0.983633 0.645398
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.678 0.660053 0.762297 12.5703 87.4199

CAGE analysis