Hb_012804_020

Information

Type -
Description -
Location Contig12804: 29622-32812
Sequence    

Annotation

kegg
ID pop:POPTR_0014s02910g
description hypothetical protein
nr
ID XP_012071660.1
description PREDICTED: abscisic acid 8'-hydroxylase 4-like [Jatropha curcas]
swissprot
ID Q9LJK2
description Abscisic acid 8'-hydroxylase 4 OS=Arabidopsis thaliana GN=CYP707A4 PE=2 SV=2
trembl
ID A0A067L1H3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04260 PE=3 SV=1
Gene Ontology
ID GO:0005506
description abscisic acid 8 -hydroxylase 4-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_08673: 29623-31388 , PASA_asmbl_08674: 31392-32866
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012804_020 0.0 - - PREDICTED: abscisic acid 8'-hydroxylase 4-like [Jatropha curcas]
2 Hb_002686_160 0.1769562793 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 12-like [Populus euphratica]
3 Hb_001198_080 0.1856779467 - - PREDICTED: uncharacterized protein LOC105633342 isoform X2 [Jatropha curcas]
4 Hb_006889_020 0.1856867338 - - eukaryotic translation initiation factor 2c, putative [Ricinus communis]
5 Hb_003408_060 0.1865526889 transcription factor TF Family: Orphans Salt-tolerance protein, putative [Ricinus communis]
6 Hb_061256_010 0.1913278415 - - PREDICTED: uncharacterized protein LOC105635220 isoform X2 [Jatropha curcas]
7 Hb_082655_010 0.1920361969 - - rhodanese-like domain-containing family protein [Populus trichocarpa]
8 Hb_000123_240 0.1920533462 - - PREDICTED: putative nuclease HARBI1 [Jatropha curcas]
9 Hb_000235_070 0.1940630199 - - PREDICTED: VIN3-like protein 2 [Jatropha curcas]
10 Hb_004545_120 0.1947951744 - - PREDICTED: uncharacterized protein LOC105647604 [Jatropha curcas]
11 Hb_001269_370 0.1960294856 - - PREDICTED: U-box domain-containing protein 43 [Jatropha curcas]
12 Hb_000334_050 0.1973704338 - - PREDICTED: vesicle-associated protein 4-1-like [Jatropha curcas]
13 Hb_000270_600 0.1976772228 - - PREDICTED: uncharacterized protein LOC105640430 isoform X1 [Jatropha curcas]
14 Hb_166876_010 0.2007112297 - - xenotropic and polytropic murine leukemia virus receptor ids-4, putative [Ricinus communis]
15 Hb_017895_060 0.2012192835 - - PREDICTED: rhodanese-like domain-containing protein 14, chloroplastic [Jatropha curcas]
16 Hb_000032_510 0.2024679634 - - PREDICTED: SUN domain-containing protein 2 [Jatropha curcas]
17 Hb_005000_080 0.2028783695 - - PREDICTED: thioredoxin-like 2, chloroplastic [Populus euphratica]
18 Hb_000011_560 0.2058036913 - - PREDICTED: phosphoinositide phosphatase SAC2 isoform X1 [Jatropha curcas]
19 Hb_005217_030 0.2058834975 - - PREDICTED: probable transcriptional regulator SLK3 [Jatropha curcas]
20 Hb_000398_170 0.2063905473 - - PREDICTED: tobamovirus multiplication protein 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_012804_020 Hb_012804_020 Hb_002686_160 Hb_002686_160 Hb_012804_020--Hb_002686_160 Hb_001198_080 Hb_001198_080 Hb_012804_020--Hb_001198_080 Hb_006889_020 Hb_006889_020 Hb_012804_020--Hb_006889_020 Hb_003408_060 Hb_003408_060 Hb_012804_020--Hb_003408_060 Hb_061256_010 Hb_061256_010 Hb_012804_020--Hb_061256_010 Hb_082655_010 Hb_082655_010 Hb_012804_020--Hb_082655_010 Hb_000589_170 Hb_000589_170 Hb_002686_160--Hb_000589_170 Hb_000757_130 Hb_000757_130 Hb_002686_160--Hb_000757_130 Hb_001729_020 Hb_001729_020 Hb_002686_160--Hb_001729_020 Hb_001377_530 Hb_001377_530 Hb_002686_160--Hb_001377_530 Hb_003894_030 Hb_003894_030 Hb_002686_160--Hb_003894_030 Hb_005305_120 Hb_005305_120 Hb_002686_160--Hb_005305_120 Hb_000818_120 Hb_000818_120 Hb_001198_080--Hb_000818_120 Hb_003106_200 Hb_003106_200 Hb_001198_080--Hb_003106_200 Hb_001155_050 Hb_001155_050 Hb_001198_080--Hb_001155_050 Hb_003549_130 Hb_003549_130 Hb_001198_080--Hb_003549_130 Hb_002217_190 Hb_002217_190 Hb_001198_080--Hb_002217_190 Hb_004679_040 Hb_004679_040 Hb_001198_080--Hb_004679_040 Hb_033152_120 Hb_033152_120 Hb_006889_020--Hb_033152_120 Hb_006445_020 Hb_006445_020 Hb_006889_020--Hb_006445_020 Hb_006889_020--Hb_001377_530 Hb_000189_170 Hb_000189_170 Hb_006889_020--Hb_000189_170 Hb_001408_170 Hb_001408_170 Hb_006889_020--Hb_001408_170 Hb_111552_010 Hb_111552_010 Hb_003408_060--Hb_111552_010 Hb_003687_130 Hb_003687_130 Hb_003408_060--Hb_003687_130 Hb_001766_070 Hb_001766_070 Hb_003408_060--Hb_001766_070 Hb_088584_010 Hb_088584_010 Hb_003408_060--Hb_088584_010 Hb_003177_070 Hb_003177_070 Hb_003408_060--Hb_003177_070 Hb_012799_050 Hb_012799_050 Hb_003408_060--Hb_012799_050 Hb_006438_020 Hb_006438_020 Hb_061256_010--Hb_006438_020 Hb_000235_070 Hb_000235_070 Hb_061256_010--Hb_000235_070 Hb_001799_160 Hb_001799_160 Hb_061256_010--Hb_001799_160 Hb_000193_260 Hb_000193_260 Hb_061256_010--Hb_000193_260 Hb_061256_010--Hb_001729_020 Hb_021576_150 Hb_021576_150 Hb_061256_010--Hb_021576_150 Hb_017895_060 Hb_017895_060 Hb_082655_010--Hb_017895_060 Hb_002045_090 Hb_002045_090 Hb_082655_010--Hb_002045_090 Hb_000958_120 Hb_000958_120 Hb_082655_010--Hb_000958_120 Hb_005694_050 Hb_005694_050 Hb_082655_010--Hb_005694_050 Hb_005074_050 Hb_005074_050 Hb_082655_010--Hb_005074_050 Hb_009545_070 Hb_009545_070 Hb_082655_010--Hb_009545_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.38176 5.19221 10.2119 4.43186 0.146103 0.429547
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.04251 0.920692 4.62253 1.45074 7.26219

CAGE analysis