Hb_003177_070

Information

Type -
Description -
Location Contig3177: 83779-87832
Sequence    

Annotation

kegg
ID cit:102622748
description ATP sulfurylase 2-like
nr
ID XP_012073823.1
description PREDICTED: ATP sulfurylase 2 [Jatropha curcas]
swissprot
ID Q43870
description ATP sulfurylase 2 OS=Arabidopsis thaliana GN=APS2 PE=1 SV=1
trembl
ID A0A067KLD2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08233 PE=4 SV=1
Gene Ontology
ID GO:0005829
description atp sulfurylase 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_33472: 83721-87860 , PASA_asmbl_33473: 83945-85645
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003177_070 0.0 - - PREDICTED: ATP sulfurylase 2 [Jatropha curcas]
2 Hb_000815_310 0.088757223 - - protein kinase, putative [Ricinus communis]
3 Hb_001009_120 0.0914792572 - - PREDICTED: transcription factor GTE10 isoform X2 [Jatropha curcas]
4 Hb_033152_090 0.0930135626 - - PREDICTED: serine/threonine-protein kinase SRK2E isoform X2 [Gossypium raimondii]
5 Hb_000418_050 0.0935367968 - - PREDICTED: uncharacterized protein LOC105636892 [Jatropha curcas]
6 Hb_000421_110 0.0980789138 - - PREDICTED: V-type proton ATPase subunit a1 isoform X2 [Jatropha curcas]
7 Hb_003777_130 0.0999611131 - - PREDICTED: uncharacterized protein LOC105640939 [Jatropha curcas]
8 Hb_000270_700 0.1043383404 - - PREDICTED: protease Do-like 9 [Populus euphratica]
9 Hb_003581_280 0.1077428376 - - KINASE 2B family protein [Populus trichocarpa]
10 Hb_005332_140 0.1081376948 - - PREDICTED: uncharacterized membrane protein At3g27390 isoform X2 [Jatropha curcas]
11 Hb_000956_040 0.1082331643 - - PREDICTED: probable E3 ubiquitin-protein ligase HIP1 [Jatropha curcas]
12 Hb_111552_010 0.1087561359 - - PREDICTED: ATP sulfurylase 2 [Jatropha curcas]
13 Hb_011930_100 0.1088268143 - - PREDICTED: dnaJ homolog subfamily B member 1 [Jatropha curcas]
14 Hb_001766_070 0.1089078288 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000640_190 0.1104292197 - - PREDICTED: proline-rich receptor-like protein kinase PERK3 isoform X1 [Jatropha curcas]
16 Hb_000452_030 0.1108539979 - - Protein phosphatase 1 regulatory subunit, putative [Ricinus communis]
17 Hb_002965_050 0.1112837128 transcription factor TF Family: ARR-B PREDICTED: two-component response regulator ARR2 [Jatropha curcas]
18 Hb_002248_120 0.1114719845 - - PREDICTED: probable serine/threonine-protein kinase At1g54610 [Jatropha curcas]
19 Hb_000045_160 0.1122112249 - - PREDICTED: glycosyltransferase family 64 protein C4 [Jatropha curcas]
20 Hb_003408_060 0.113293366 transcription factor TF Family: Orphans Salt-tolerance protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_003177_070 Hb_003177_070 Hb_000815_310 Hb_000815_310 Hb_003177_070--Hb_000815_310 Hb_001009_120 Hb_001009_120 Hb_003177_070--Hb_001009_120 Hb_033152_090 Hb_033152_090 Hb_003177_070--Hb_033152_090 Hb_000418_050 Hb_000418_050 Hb_003177_070--Hb_000418_050 Hb_000421_110 Hb_000421_110 Hb_003177_070--Hb_000421_110 Hb_003777_130 Hb_003777_130 Hb_003177_070--Hb_003777_130 Hb_003540_250 Hb_003540_250 Hb_000815_310--Hb_003540_250 Hb_000815_310--Hb_003777_130 Hb_000815_310--Hb_033152_090 Hb_002965_050 Hb_002965_050 Hb_000815_310--Hb_002965_050 Hb_007416_260 Hb_007416_260 Hb_000815_310--Hb_007416_260 Hb_002876_210 Hb_002876_210 Hb_000815_310--Hb_002876_210 Hb_001009_120--Hb_033152_090 Hb_000640_190 Hb_000640_190 Hb_001009_120--Hb_000640_190 Hb_000956_040 Hb_000956_040 Hb_001009_120--Hb_000956_040 Hb_006452_180 Hb_006452_180 Hb_001009_120--Hb_006452_180 Hb_004319_050 Hb_004319_050 Hb_001009_120--Hb_004319_050 Hb_009178_010 Hb_009178_010 Hb_001009_120--Hb_009178_010 Hb_033152_090--Hb_000640_190 Hb_000258_420 Hb_000258_420 Hb_033152_090--Hb_000258_420 Hb_033152_090--Hb_000956_040 Hb_033152_090--Hb_003777_130 Hb_000270_700 Hb_000270_700 Hb_000418_050--Hb_000270_700 Hb_001133_090 Hb_001133_090 Hb_000418_050--Hb_001133_090 Hb_000418_050--Hb_000421_110 Hb_005885_030 Hb_005885_030 Hb_000418_050--Hb_005885_030 Hb_000261_280 Hb_000261_280 Hb_000418_050--Hb_000261_280 Hb_002107_100 Hb_002107_100 Hb_000418_050--Hb_002107_100 Hb_000421_110--Hb_001133_090 Hb_007031_040 Hb_007031_040 Hb_000421_110--Hb_007031_040 Hb_000421_110--Hb_000270_700 Hb_001911_010 Hb_001911_010 Hb_000421_110--Hb_001911_010 Hb_000421_110--Hb_004319_050 Hb_003777_130--Hb_000258_420 Hb_004375_110 Hb_004375_110 Hb_003777_130--Hb_004375_110 Hb_000671_030 Hb_000671_030 Hb_003777_130--Hb_000671_030 Hb_003777_130--Hb_000640_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.40935 37.1127 37.5954 23.9931 8.26754 7.45631
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.95888 4.4811 11.8904 10.0269 21.2463

CAGE analysis