Hb_007031_040

Information

Type transcription factor
Description TF Family: bZIP
Location Contig7031: 40471-44056
Sequence    

Annotation

kegg
ID rcu:RCOM_1105770
description transcription factor hy5, putative
nr
ID XP_012084505.1
description PREDICTED: bZIP transcription factor 17-like [Jatropha curcas]
swissprot
ID O22208
description bZIP transcription factor 17 OS=Arabidopsis thaliana GN=BZIP17 PE=1 SV=2
trembl
ID A0A067K5I5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20138 PE=4 SV=1
Gene Ontology
ID GO:0003700
description transcription factor

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_54978: 40673-44047
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007031_040 0.0 transcription factor TF Family: bZIP PREDICTED: bZIP transcription factor 17-like [Jatropha curcas]
2 Hb_000421_110 0.0666873318 - - PREDICTED: V-type proton ATPase subunit a1 isoform X2 [Jatropha curcas]
3 Hb_001911_010 0.0695361829 - - PREDICTED: ALA-interacting subunit 3-like [Jatropha curcas]
4 Hb_001133_090 0.0705692885 - - hypothetical protein POPTR_0012s02680g [Populus trichocarpa]
5 Hb_000270_110 0.0705812516 - - PREDICTED: calcium-dependent protein kinase 10 [Jatropha curcas]
6 Hb_159295_010 0.0894178574 - - hypothetical protein RCOM_1520720 [Ricinus communis]
7 Hb_001410_130 0.0996522013 - - hypothetical protein POPTR_0001s10880g [Populus trichocarpa]
8 Hb_000941_080 0.099919661 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 7-like isoform X3 [Populus euphratica]
9 Hb_004324_060 0.1017266205 - - Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
10 Hb_004800_130 0.1036573716 - - hypothetical protein POPTR_0005s12580g [Populus trichocarpa]
11 Hb_003895_020 0.1050409844 - - PREDICTED: dedicator of cytokinesis protein 7 isoform X2 [Jatropha curcas]
12 Hb_152910_010 0.1063177132 - - PREDICTED: uncharacterized protein LOC105632212 [Jatropha curcas]
13 Hb_005649_090 0.1079822632 - - PREDICTED: ninja-family protein AFP3-like [Jatropha curcas]
14 Hb_005885_030 0.1082724326 desease resistance Gene Name: TIR PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Jatropha curcas]
15 Hb_001009_090 0.108392264 - - CDK protein [Hevea brasiliensis]
16 Hb_003849_220 0.1085444596 - - PREDICTED: non-functional NADPH-dependent codeinone reductase 2-like [Jatropha curcas]
17 Hb_000418_050 0.1088446132 - - PREDICTED: uncharacterized protein LOC105636892 [Jatropha curcas]
18 Hb_002248_120 0.1113449876 - - PREDICTED: probable serine/threonine-protein kinase At1g54610 [Jatropha curcas]
19 Hb_001259_110 0.11219986 - - PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 3 [Jatropha curcas]
20 Hb_172421_010 0.1127968616 - - cysteine protease [Hevea brasiliensis]

Gene co-expression network

sample Hb_007031_040 Hb_007031_040 Hb_000421_110 Hb_000421_110 Hb_007031_040--Hb_000421_110 Hb_001911_010 Hb_001911_010 Hb_007031_040--Hb_001911_010 Hb_001133_090 Hb_001133_090 Hb_007031_040--Hb_001133_090 Hb_000270_110 Hb_000270_110 Hb_007031_040--Hb_000270_110 Hb_159295_010 Hb_159295_010 Hb_007031_040--Hb_159295_010 Hb_001410_130 Hb_001410_130 Hb_007031_040--Hb_001410_130 Hb_000421_110--Hb_001133_090 Hb_000418_050 Hb_000418_050 Hb_000421_110--Hb_000418_050 Hb_000270_700 Hb_000270_700 Hb_000421_110--Hb_000270_700 Hb_000421_110--Hb_001911_010 Hb_004319_050 Hb_004319_050 Hb_000421_110--Hb_004319_050 Hb_001911_010--Hb_159295_010 Hb_002248_120 Hb_002248_120 Hb_001911_010--Hb_002248_120 Hb_001911_010--Hb_001410_130 Hb_005403_010 Hb_005403_010 Hb_001911_010--Hb_005403_010 Hb_001133_090--Hb_000418_050 Hb_005885_030 Hb_005885_030 Hb_001133_090--Hb_005885_030 Hb_001133_090--Hb_000270_700 Hb_010775_010 Hb_010775_010 Hb_001133_090--Hb_010775_010 Hb_000270_110--Hb_000421_110 Hb_000270_110--Hb_001133_090 Hb_005649_090 Hb_005649_090 Hb_000270_110--Hb_005649_090 Hb_000270_110--Hb_001911_010 Hb_000941_080 Hb_000941_080 Hb_000270_110--Hb_000941_080 Hb_005765_040 Hb_005765_040 Hb_159295_010--Hb_005765_040 Hb_002812_010 Hb_002812_010 Hb_159295_010--Hb_002812_010 Hb_002249_050 Hb_002249_050 Hb_159295_010--Hb_002249_050 Hb_004526_010 Hb_004526_010 Hb_159295_010--Hb_004526_010 Hb_011249_060 Hb_011249_060 Hb_159295_010--Hb_011249_060 Hb_001410_130--Hb_000941_080 Hb_001009_090 Hb_001009_090 Hb_001410_130--Hb_001009_090 Hb_006054_030 Hb_006054_030 Hb_001410_130--Hb_006054_030 Hb_002119_090 Hb_002119_090 Hb_001410_130--Hb_002119_090 Hb_044653_020 Hb_044653_020 Hb_001410_130--Hb_044653_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.9346 72.3473 44.1118 39.2109 20.7007 16.2989
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.30379 4.04871 10.2178 28.8833 22.6531

CAGE analysis