Hb_159295_010

Information

Type -
Description -
Location Contig159295: 574-1525
Sequence    

Annotation

kegg
ID rcu:RCOM_1520720
description hypothetical protein
nr
ID XP_002524266.1
description hypothetical protein RCOM_1520720 [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SE51
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1520720 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_159295_010 0.0 - - hypothetical protein RCOM_1520720 [Ricinus communis]
2 Hb_005765_040 0.0554318762 - - transcription elongation factor s-II, putative [Ricinus communis]
3 Hb_001911_010 0.0655136952 - - PREDICTED: ALA-interacting subunit 3-like [Jatropha curcas]
4 Hb_002812_010 0.0791637302 - - PREDICTED: chitin elicitor receptor kinase 1 isoform X1 [Jatropha curcas]
5 Hb_002249_050 0.0812666215 - - Auxin response factor, putative [Ricinus communis]
6 Hb_004526_010 0.0831181356 - - signal recognition particle receptor alpha subunit, putative [Ricinus communis]
7 Hb_011249_060 0.0849526401 - - hypothetical protein POPTR_0018s12600g [Populus trichocarpa]
8 Hb_003895_020 0.0882485186 - - PREDICTED: dedicator of cytokinesis protein 7 isoform X2 [Jatropha curcas]
9 Hb_000421_110 0.0883854315 - - PREDICTED: V-type proton ATPase subunit a1 isoform X2 [Jatropha curcas]
10 Hb_001410_130 0.0887707515 - - hypothetical protein POPTR_0001s10880g [Populus trichocarpa]
11 Hb_007031_040 0.0894178574 transcription factor TF Family: bZIP PREDICTED: bZIP transcription factor 17-like [Jatropha curcas]
12 Hb_001341_160 0.0914156202 - - PREDICTED: E3 SUMO-protein ligase SIZ1 isoform X2 [Jatropha curcas]
13 Hb_000428_030 0.0925996022 - - hypothetical protein RCOM_1520720 [Ricinus communis]
14 Hb_009486_160 0.0933207559 - - PREDICTED: metacaspase-1 [Jatropha curcas]
15 Hb_000866_080 0.0947514226 - - PREDICTED: signal peptide peptidase-like 4 isoform X1 [Jatropha curcas]
16 Hb_006794_020 0.0950018145 - - PREDICTED: uncharacterized protein LOC105645849 isoform X6 [Jatropha curcas]
17 Hb_005834_040 0.0953911283 - - PREDICTED: cation-chloride cotransporter 1 [Jatropha curcas]
18 Hb_002387_040 0.0963069097 - - protein transporter, putative [Ricinus communis]
19 Hb_000613_220 0.0973528758 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1-like [Jatropha curcas]
20 Hb_013358_060 0.0974028481 - - PREDICTED: uncharacterized protein LOC105637564 [Jatropha curcas]

Gene co-expression network

sample Hb_159295_010 Hb_159295_010 Hb_005765_040 Hb_005765_040 Hb_159295_010--Hb_005765_040 Hb_001911_010 Hb_001911_010 Hb_159295_010--Hb_001911_010 Hb_002812_010 Hb_002812_010 Hb_159295_010--Hb_002812_010 Hb_002249_050 Hb_002249_050 Hb_159295_010--Hb_002249_050 Hb_004526_010 Hb_004526_010 Hb_159295_010--Hb_004526_010 Hb_011249_060 Hb_011249_060 Hb_159295_010--Hb_011249_060 Hb_005765_040--Hb_011249_060 Hb_001341_160 Hb_001341_160 Hb_005765_040--Hb_001341_160 Hb_009302_030 Hb_009302_030 Hb_005765_040--Hb_009302_030 Hb_002918_320 Hb_002918_320 Hb_005765_040--Hb_002918_320 Hb_003604_050 Hb_003604_050 Hb_005765_040--Hb_003604_050 Hb_007031_040 Hb_007031_040 Hb_001911_010--Hb_007031_040 Hb_002248_120 Hb_002248_120 Hb_001911_010--Hb_002248_120 Hb_001410_130 Hb_001410_130 Hb_001911_010--Hb_001410_130 Hb_000421_110 Hb_000421_110 Hb_001911_010--Hb_000421_110 Hb_005403_010 Hb_005403_010 Hb_001911_010--Hb_005403_010 Hb_009486_160 Hb_009486_160 Hb_002812_010--Hb_009486_160 Hb_001257_100 Hb_001257_100 Hb_002812_010--Hb_001257_100 Hb_001862_110 Hb_001862_110 Hb_002812_010--Hb_001862_110 Hb_000926_150 Hb_000926_150 Hb_002812_010--Hb_000926_150 Hb_008948_140 Hb_008948_140 Hb_002812_010--Hb_008948_140 Hb_002249_050--Hb_005765_040 Hb_002400_160 Hb_002400_160 Hb_002249_050--Hb_002400_160 Hb_002154_020 Hb_002154_020 Hb_002249_050--Hb_002154_020 Hb_000613_220 Hb_000613_220 Hb_002249_050--Hb_000613_220 Hb_001488_040 Hb_001488_040 Hb_002249_050--Hb_001488_040 Hb_004319_050 Hb_004319_050 Hb_004526_010--Hb_004319_050 Hb_000796_120 Hb_000796_120 Hb_004526_010--Hb_000796_120 Hb_030545_030 Hb_030545_030 Hb_004526_010--Hb_030545_030 Hb_003992_180 Hb_003992_180 Hb_004526_010--Hb_003992_180 Hb_004526_010--Hb_009486_160 Hb_001427_150 Hb_001427_150 Hb_011249_060--Hb_001427_150 Hb_011249_060--Hb_009302_030 Hb_004899_040 Hb_004899_040 Hb_011249_060--Hb_004899_040 Hb_011249_060--Hb_009486_160 Hb_002903_140 Hb_002903_140 Hb_011249_060--Hb_002903_140 Hb_015183_100 Hb_015183_100 Hb_011249_060--Hb_015183_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.13831 25.7295 13.6642 9.64961 7.3474 6.35632
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.66087 3.65914 4.07455 11.2274 9.67692

CAGE analysis