Hb_012707_040

Information

Type -
Description -
Location Contig12707: 20208-23461
Sequence    

Annotation

kegg
ID rcu:RCOM_1341610
description Phosphatase DCR2, putative
nr
ID XP_012083068.1
description PREDICTED: probable inactive purple acid phosphatase 29 [Jatropha curcas]
swissprot
ID Q9FMK9
description Probable inactive purple acid phosphatase 29 OS=Arabidopsis thaliana GN=PAP29 PE=2 SV=1
trembl
ID A0A067JWX6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14153 PE=4 SV=1
Gene Ontology
ID GO:0016787
description probable inactive purple acid phosphatase 29

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_08316: 20201-23286
cDNA
(Sanger)
(ID:Location)		 012_L04.ab1: 20208-21003 , 046_O05.ab1: 20415-21122

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012707_040 0.0 - - PREDICTED: probable inactive purple acid phosphatase 29 [Jatropha curcas]
2 Hb_010042_020 0.1142768148 - - UDP-n-acteylglucosamine pyrophosphorylase, putative [Ricinus communis]
3 Hb_001486_040 0.1145807219 - - PREDICTED: uncharacterized protein LOC105632624 isoform X1 [Jatropha curcas]
4 Hb_007537_030 0.1240399207 - - PREDICTED: gamma aminobutyrate transaminase 3, chloroplastic [Jatropha curcas]
5 Hb_004449_250 0.1246390698 - - PREDICTED: protein EI24 homolog [Jatropha curcas]
6 Hb_011360_110 0.1248354015 - - PREDICTED: UDP-glucose 6-dehydrogenase 1 [Vitis vinifera]
7 Hb_010390_010 0.1275169122 - - casein kinase, putative [Ricinus communis]
8 Hb_006469_070 0.1354864641 - - PREDICTED: F-box/kelch-repeat protein At1g22040 [Jatropha curcas]
9 Hb_000684_310 0.1387752185 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720 [Jatropha curcas]
10 Hb_000696_070 0.139555478 - - PREDICTED: aspartic proteinase-like protein 1 [Jatropha curcas]
11 Hb_002955_020 0.1406761887 - - PREDICTED: calcium uniporter protein 6, mitochondrial-like [Jatropha curcas]
12 Hb_001546_010 0.1409647536 - - conserved hypothetical protein [Ricinus communis]
13 Hb_003207_020 0.14154899 - - PREDICTED: bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Jatropha curcas]
14 Hb_009674_010 0.1430324171 - - AAEL007687-PA [Aedes aegypti]
15 Hb_003371_070 0.1430529504 - - PREDICTED: citrate synthase, mitochondrial [Jatropha curcas]
16 Hb_001474_020 0.1446689073 - - PREDICTED: uncharacterized protein LOC105650917 [Jatropha curcas]
17 Hb_002781_050 0.1450907276 - - cytochrome B5 isoform 1, putative [Ricinus communis]
18 Hb_001301_280 0.1459960439 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000258_050 0.1470162216 transcription factor TF Family: B3 PREDICTED: B3 domain-containing transcription repressor VAL2 isoform X2 [Jatropha curcas]
20 Hb_000861_100 0.1496847155 - - PREDICTED: probable fucosyltransferase 8 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_012707_040 Hb_012707_040 Hb_010042_020 Hb_010042_020 Hb_012707_040--Hb_010042_020 Hb_001486_040 Hb_001486_040 Hb_012707_040--Hb_001486_040 Hb_007537_030 Hb_007537_030 Hb_012707_040--Hb_007537_030 Hb_004449_250 Hb_004449_250 Hb_012707_040--Hb_004449_250 Hb_011360_110 Hb_011360_110 Hb_012707_040--Hb_011360_110 Hb_010390_010 Hb_010390_010 Hb_012707_040--Hb_010390_010 Hb_033152_070 Hb_033152_070 Hb_010042_020--Hb_033152_070 Hb_003207_020 Hb_003207_020 Hb_010042_020--Hb_003207_020 Hb_000928_190 Hb_000928_190 Hb_010042_020--Hb_000928_190 Hb_010042_020--Hb_001486_040 Hb_004525_040 Hb_004525_040 Hb_010042_020--Hb_004525_040 Hb_000107_110 Hb_000107_110 Hb_010042_020--Hb_000107_110 Hb_185830_060 Hb_185830_060 Hb_001486_040--Hb_185830_060 Hb_001486_040--Hb_003207_020 Hb_001486_040--Hb_033152_070 Hb_002193_060 Hb_002193_060 Hb_001486_040--Hb_002193_060 Hb_002955_020 Hb_002955_020 Hb_001486_040--Hb_002955_020 Hb_000570_020 Hb_000570_020 Hb_007537_030--Hb_000570_020 Hb_000157_140 Hb_000157_140 Hb_007537_030--Hb_000157_140 Hb_004030_060 Hb_004030_060 Hb_007537_030--Hb_004030_060 Hb_018845_010 Hb_018845_010 Hb_007537_030--Hb_018845_010 Hb_021576_070 Hb_021576_070 Hb_007537_030--Hb_021576_070 Hb_004326_010 Hb_004326_010 Hb_007537_030--Hb_004326_010 Hb_000320_350 Hb_000320_350 Hb_004449_250--Hb_000320_350 Hb_004449_250--Hb_011360_110 Hb_003006_080 Hb_003006_080 Hb_004449_250--Hb_003006_080 Hb_000258_050 Hb_000258_050 Hb_004449_250--Hb_000258_050 Hb_004449_250--Hb_007537_030 Hb_001474_020 Hb_001474_020 Hb_011360_110--Hb_001474_020 Hb_028639_030 Hb_028639_030 Hb_011360_110--Hb_028639_030 Hb_132840_160 Hb_132840_160 Hb_011360_110--Hb_132840_160 Hb_005489_150 Hb_005489_150 Hb_011360_110--Hb_005489_150 Hb_011360_110--Hb_000320_350 Hb_000494_030 Hb_000494_030 Hb_010390_010--Hb_000494_030 Hb_010390_010--Hb_004030_060 Hb_000683_050 Hb_000683_050 Hb_010390_010--Hb_000683_050 Hb_005016_010 Hb_005016_010 Hb_010390_010--Hb_005016_010 Hb_001473_170 Hb_001473_170 Hb_010390_010--Hb_001473_170 Hb_007416_070 Hb_007416_070 Hb_010390_010--Hb_007416_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.20192 12.0691 12.2707 47.069 0.685047 7.52233
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
11.7916 7.0573 6.97245 19.0499 28.6515

CAGE analysis