Hb_011931_060

Information

Type -
Description -
Location Contig11931: 33901-39081
Sequence    

Annotation

kegg
ID rcu:RCOM_0151790
description peptidylprolyl isomerase, putative (EC:5.2.1.8)
nr
ID XP_012085200.1
description PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP62-like [Jatropha curcas]
swissprot
ID Q38931
description Peptidyl-prolyl cis-trans isomerase FKBP62 OS=Arabidopsis thaliana GN=FKBP62 PE=1 SV=2
trembl
ID A0A067LKQ9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15140 PE=4 SV=1
Gene Ontology
ID GO:0003755
description peptidyl-prolyl cis-trans isomerase fkbp62-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_05729: 33914-39072 , PASA_asmbl_05730: 37865-38137
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011931_060 0.0 - - PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP62-like [Jatropha curcas]
2 Hb_000479_170 0.0881740877 - - chaperone clpb, putative [Ricinus communis]
3 Hb_000816_100 0.0897549094 - - PREDICTED: APO protein 1, chloroplastic isoform X1 [Jatropha curcas]
4 Hb_002368_070 0.0929115609 - - PREDICTED: uncharacterized protein LOC105634087 [Jatropha curcas]
5 Hb_000958_070 0.1033289283 - - hypothetical protein PRUPE_ppa007681mg [Prunus persica]
6 Hb_000331_560 0.1033334323 transcription factor TF Family: C2H2 PREDICTED: lysine-specific demethylase REF6 [Jatropha curcas]
7 Hb_000033_110 0.1040133776 - - hypothetical protein JCGZ_19253 [Jatropha curcas]
8 Hb_009252_040 0.10513998 - - PREDICTED: protein EXECUTER 2, chloroplastic [Jatropha curcas]
9 Hb_048141_020 0.1052303904 - - tetratricopeptide repeat-like superfamily protein, partial [Manihot esculenta]
10 Hb_002233_130 0.1060576054 - - transporter, putative [Ricinus communis]
11 Hb_006618_050 0.1092032679 - - PREDICTED: elongation factor G-2, chloroplastic [Jatropha curcas]
12 Hb_001259_020 0.110872945 - - PREDICTED: translocase of chloroplast 90, chloroplastic [Jatropha curcas]
13 Hb_005250_030 0.1108780062 - - PREDICTED: uncharacterized protein LOC105640177 [Jatropha curcas]
14 Hb_137276_010 0.1109868688 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
15 Hb_005470_020 0.1161223774 - - PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Jatropha curcas]
16 Hb_002600_060 0.1166157799 - - PREDICTED: putative nuclear matrix constituent protein 1-like protein [Jatropha curcas]
17 Hb_000300_120 0.1173463267 - - PREDICTED: zinc finger protein VAR3, chloroplastic [Jatropha curcas]
18 Hb_000015_100 0.1186057674 - - PREDICTED: probable methionine--tRNA ligase, mitochondrial [Jatropha curcas]
19 Hb_000349_240 0.1191463905 - - PREDICTED: probable aminotransferase ACS10 isoform X1 [Jatropha curcas]
20 Hb_001623_280 0.1201108441 - - PREDICTED: chaperonin CPN60-2, mitochondrial [Jatropha curcas]

Gene co-expression network

sample Hb_011931_060 Hb_011931_060 Hb_000479_170 Hb_000479_170 Hb_011931_060--Hb_000479_170 Hb_000816_100 Hb_000816_100 Hb_011931_060--Hb_000816_100 Hb_002368_070 Hb_002368_070 Hb_011931_060--Hb_002368_070 Hb_000958_070 Hb_000958_070 Hb_011931_060--Hb_000958_070 Hb_000331_560 Hb_000331_560 Hb_011931_060--Hb_000331_560 Hb_000033_110 Hb_000033_110 Hb_011931_060--Hb_000033_110 Hb_007769_040 Hb_007769_040 Hb_000479_170--Hb_007769_040 Hb_005250_010 Hb_005250_010 Hb_000479_170--Hb_005250_010 Hb_025477_050 Hb_025477_050 Hb_000479_170--Hb_025477_050 Hb_005211_020 Hb_005211_020 Hb_000479_170--Hb_005211_020 Hb_007545_130 Hb_007545_130 Hb_000479_170--Hb_007545_130 Hb_048141_020 Hb_048141_020 Hb_000816_100--Hb_048141_020 Hb_001089_060 Hb_001089_060 Hb_000816_100--Hb_001089_060 Hb_001259_020 Hb_001259_020 Hb_000816_100--Hb_001259_020 Hb_023278_010 Hb_023278_010 Hb_000816_100--Hb_023278_010 Hb_021346_030 Hb_021346_030 Hb_000816_100--Hb_021346_030 Hb_006618_050 Hb_006618_050 Hb_002368_070--Hb_006618_050 Hb_005250_030 Hb_005250_030 Hb_002368_070--Hb_005250_030 Hb_002636_110 Hb_002636_110 Hb_002368_070--Hb_002636_110 Hb_001623_280 Hb_001623_280 Hb_002368_070--Hb_001623_280 Hb_031658_040 Hb_031658_040 Hb_002368_070--Hb_031658_040 Hb_000260_560 Hb_000260_560 Hb_000958_070--Hb_000260_560 Hb_011344_020 Hb_011344_020 Hb_000958_070--Hb_011344_020 Hb_004631_150 Hb_004631_150 Hb_000958_070--Hb_004631_150 Hb_002233_130 Hb_002233_130 Hb_000958_070--Hb_002233_130 Hb_162275_040 Hb_162275_040 Hb_000958_070--Hb_162275_040 Hb_006355_020 Hb_006355_020 Hb_000958_070--Hb_006355_020 Hb_002600_060 Hb_002600_060 Hb_000331_560--Hb_002600_060 Hb_003203_030 Hb_003203_030 Hb_000331_560--Hb_003203_030 Hb_018118_010 Hb_018118_010 Hb_000331_560--Hb_018118_010 Hb_003506_050 Hb_003506_050 Hb_000331_560--Hb_003506_050 Hb_000300_120 Hb_000300_120 Hb_000331_560--Hb_000300_120 Hb_009252_040 Hb_009252_040 Hb_000331_560--Hb_009252_040 Hb_013405_080 Hb_013405_080 Hb_000033_110--Hb_013405_080 Hb_000033_110--Hb_009252_040 Hb_000320_470 Hb_000320_470 Hb_000033_110--Hb_000320_470 Hb_004003_040 Hb_004003_040 Hb_000033_110--Hb_004003_040 Hb_026053_040 Hb_026053_040 Hb_000033_110--Hb_026053_040 Hb_000015_100 Hb_000015_100 Hb_000033_110--Hb_000015_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
203.167 183.689 167.584 149.645 330.711 255.289
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
139.265 72.4133 98.1062 160.289 591.007

CAGE analysis