Hb_001089_060

Information

Type -
Description -
Location Contig1089: 45291-55726
Sequence    

Annotation

kegg
ID rcu:RCOM_0708740
description fyve finger-containing phosphoinositide kinase, fyv1, putative (EC:2.7.1.150)
nr
ID XP_012077115.1
description PREDICTED: 1-phosphatidylinositol-3-phosphate 5-kinase FAB1A isoform X1 [Jatropha curcas]
swissprot
ID Q9LUM0
description 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana GN=FAB1B PE=2 SV=1
trembl
ID A0A067KCV0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07538 PE=4 SV=1
Gene Ontology
ID GO:0000285
description 1-phosphatidylinositol-3-phosphate 5-kinase fab1a-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_02703: 45382-55716
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001089_060 0.0 - - PREDICTED: 1-phosphatidylinositol-3-phosphate 5-kinase FAB1A isoform X1 [Jatropha curcas]
2 Hb_000816_100 0.0760523321 - - PREDICTED: APO protein 1, chloroplastic isoform X1 [Jatropha curcas]
3 Hb_000016_130 0.0952333893 - - PREDICTED: molybdenum cofactor sulfurase [Jatropha curcas]
4 Hb_000300_120 0.1052154415 - - PREDICTED: zinc finger protein VAR3, chloroplastic [Jatropha curcas]
5 Hb_000033_110 0.1063724247 - - hypothetical protein JCGZ_19253 [Jatropha curcas]
6 Hb_001498_010 0.1066073743 - - PREDICTED: uncharacterized protein LOC105648994 [Jatropha curcas]
7 Hb_001259_020 0.1067251285 - - PREDICTED: translocase of chloroplast 90, chloroplastic [Jatropha curcas]
8 Hb_000331_560 0.107339673 transcription factor TF Family: C2H2 PREDICTED: lysine-specific demethylase REF6 [Jatropha curcas]
9 Hb_004680_120 0.1164771781 - - PREDICTED: UDP-glucuronic acid decarboxylase 1 [Jatropha curcas]
10 Hb_000015_100 0.1171589054 - - PREDICTED: probable methionine--tRNA ligase, mitochondrial [Jatropha curcas]
11 Hb_000479_170 0.1187394181 - - chaperone clpb, putative [Ricinus communis]
12 Hb_002027_090 0.1193481541 - - -
13 Hb_000181_240 0.1195649438 - - PREDICTED: uncharacterized protein LOC105637672 [Jatropha curcas]
14 Hb_021346_030 0.1196990975 - - PREDICTED: uncharacterized protein LOC105141875 [Populus euphratica]
15 Hb_012053_090 0.1204788561 transcription factor TF Family: DDT PREDICTED: uncharacterized protein LOC105637346 [Jatropha curcas]
16 Hb_002053_110 0.1225634589 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
17 Hb_004003_040 0.1234955629 - - dead box ATP-dependent RNA helicase, putative [Ricinus communis]
18 Hb_000540_130 0.1235030923 transcription factor TF Family: Pseudo ARR-B sensory transduction histidine kinase, putative [Ricinus communis]
19 Hb_048141_020 0.1247448987 - - tetratricopeptide repeat-like superfamily protein, partial [Manihot esculenta]
20 Hb_003203_030 0.1263756397 - - PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Jatropha curcas]

Gene co-expression network

sample Hb_001089_060 Hb_001089_060 Hb_000816_100 Hb_000816_100 Hb_001089_060--Hb_000816_100 Hb_000016_130 Hb_000016_130 Hb_001089_060--Hb_000016_130 Hb_000300_120 Hb_000300_120 Hb_001089_060--Hb_000300_120 Hb_000033_110 Hb_000033_110 Hb_001089_060--Hb_000033_110 Hb_001498_010 Hb_001498_010 Hb_001089_060--Hb_001498_010 Hb_001259_020 Hb_001259_020 Hb_001089_060--Hb_001259_020 Hb_048141_020 Hb_048141_020 Hb_000816_100--Hb_048141_020 Hb_000816_100--Hb_001259_020 Hb_023278_010 Hb_023278_010 Hb_000816_100--Hb_023278_010 Hb_021346_030 Hb_021346_030 Hb_000816_100--Hb_021346_030 Hb_011931_060 Hb_011931_060 Hb_000816_100--Hb_011931_060 Hb_000016_130--Hb_000816_100 Hb_000016_130--Hb_021346_030 Hb_000016_130--Hb_001259_020 Hb_008221_180 Hb_008221_180 Hb_000016_130--Hb_008221_180 Hb_002374_240 Hb_002374_240 Hb_000016_130--Hb_002374_240 Hb_000331_560 Hb_000331_560 Hb_000300_120--Hb_000331_560 Hb_018118_010 Hb_018118_010 Hb_000300_120--Hb_018118_010 Hb_000041_090 Hb_000041_090 Hb_000300_120--Hb_000041_090 Hb_006295_020 Hb_006295_020 Hb_000300_120--Hb_006295_020 Hb_003203_030 Hb_003203_030 Hb_000300_120--Hb_003203_030 Hb_000300_120--Hb_000816_100 Hb_013405_080 Hb_013405_080 Hb_000033_110--Hb_013405_080 Hb_009252_040 Hb_009252_040 Hb_000033_110--Hb_009252_040 Hb_000320_470 Hb_000320_470 Hb_000033_110--Hb_000320_470 Hb_004003_040 Hb_004003_040 Hb_000033_110--Hb_004003_040 Hb_026053_040 Hb_026053_040 Hb_000033_110--Hb_026053_040 Hb_000015_100 Hb_000015_100 Hb_000033_110--Hb_000015_100 Hb_000039_150 Hb_000039_150 Hb_001498_010--Hb_000039_150 Hb_000037_190 Hb_000037_190 Hb_001498_010--Hb_000037_190 Hb_004680_120 Hb_004680_120 Hb_001498_010--Hb_004680_120 Hb_001498_010--Hb_003203_030 Hb_002055_040 Hb_002055_040 Hb_001498_010--Hb_002055_040 Hb_001498_010--Hb_004003_040 Hb_000661_030 Hb_000661_030 Hb_001259_020--Hb_000661_030 Hb_001259_020--Hb_003203_030 Hb_001259_020--Hb_000331_560 Hb_000627_250 Hb_000627_250 Hb_001259_020--Hb_000627_250 Hb_001259_020--Hb_001498_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
14.9957 14.8708 13.7242 15.7226 20.7884 27.2358
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.17467 7.87402 17.4212 7.05568 42.3436

CAGE analysis