Hb_011232_010

Information

Type -
Description -
Location Contig11232: 807-2853
Sequence    

Annotation

kegg
ID tcc:TCM_037044
description Leucine-rich repeat receptor-like protein kinase family protein
nr
ID XP_007011919.1
description Leucine-rich repeat receptor-like protein kinase family protein [Theobroma cacao]
swissprot
ID Q8VZG8
description Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=2 SV=3
trembl
ID A0A061GJD6
description Leucine-rich repeat receptor-like protein kinase family protein OS=Theobroma cacao GN=TCM_037044 PE=4 SV=1
Gene Ontology
ID GO:0016772
description leucine-rich repeat receptor-like protein kinase family

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011232_010 0.0 - - Leucine-rich repeat receptor-like protein kinase family protein [Theobroma cacao]
2 Hb_008078_020 0.2149849032 - - hypothetical protein JCGZ_01297 [Jatropha curcas]
3 Hb_004570_040 0.2328877668 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
4 Hb_171900_030 0.2353849843 transcription factor TF Family: MYB PREDICTED: myb-related protein MYBAS2 [Jatropha curcas]
5 Hb_006873_030 0.2391830355 - - receptor serine/threonine kinase, putative [Ricinus communis]
6 Hb_005545_080 0.2439712969 - - hypothetical protein JCGZ_01293 [Jatropha curcas]
7 Hb_002097_120 0.2452573747 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
8 Hb_005833_020 0.2483991542 - - PREDICTED: serine/threonine-protein kinase HT1 [Jatropha curcas]
9 Hb_007166_030 0.2600969031 - - -
10 Hb_001004_010 0.2601667949 - - conserved hypothetical protein [Ricinus communis]
11 Hb_091913_010 0.2612659711 - - PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
12 Hb_000297_100 0.2620838769 transcription factor TF Family: NAC NAC transcription factor 038 [Jatropha curcas]
13 Hb_004647_010 0.2624546346 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
14 Hb_008897_020 0.2655862383 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 [Musa acuminata subsp. malaccensis]
15 Hb_000307_110 0.267791109 - - hypothetical protein JCGZ_08160 [Jatropha curcas]
16 Hb_005656_200 0.2681692947 - - Cation transport protein chaC, putative [Ricinus communis]
17 Hb_007858_030 0.2696909907 - - retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa Japonica Group]
18 Hb_039650_030 0.2697003926 - - hypothetical protein RCOM_2128750 [Ricinus communis]
19 Hb_090306_010 0.2708219434 - - hypothetical protein POPTR_0007s02300g [Populus trichocarpa]
20 Hb_000856_410 0.2709224955 - - ABC transporter family protein [Hevea brasiliensis]

Gene co-expression network

sample Hb_011232_010 Hb_011232_010 Hb_008078_020 Hb_008078_020 Hb_011232_010--Hb_008078_020 Hb_004570_040 Hb_004570_040 Hb_011232_010--Hb_004570_040 Hb_171900_030 Hb_171900_030 Hb_011232_010--Hb_171900_030 Hb_006873_030 Hb_006873_030 Hb_011232_010--Hb_006873_030 Hb_005545_080 Hb_005545_080 Hb_011232_010--Hb_005545_080 Hb_002097_120 Hb_002097_120 Hb_011232_010--Hb_002097_120 Hb_000297_100 Hb_000297_100 Hb_008078_020--Hb_000297_100 Hb_008078_020--Hb_005545_080 Hb_000307_110 Hb_000307_110 Hb_008078_020--Hb_000307_110 Hb_125884_010 Hb_125884_010 Hb_008078_020--Hb_125884_010 Hb_000649_160 Hb_000649_160 Hb_008078_020--Hb_000649_160 Hb_005656_200 Hb_005656_200 Hb_008078_020--Hb_005656_200 Hb_185080_010 Hb_185080_010 Hb_004570_040--Hb_185080_010 Hb_003375_080 Hb_003375_080 Hb_004570_040--Hb_003375_080 Hb_004570_040--Hb_000307_110 Hb_000397_090 Hb_000397_090 Hb_004570_040--Hb_000397_090 Hb_004570_040--Hb_005545_080 Hb_000434_050 Hb_000434_050 Hb_004570_040--Hb_000434_050 Hb_008890_030 Hb_008890_030 Hb_171900_030--Hb_008890_030 Hb_002076_030 Hb_002076_030 Hb_171900_030--Hb_002076_030 Hb_000879_240 Hb_000879_240 Hb_171900_030--Hb_000879_240 Hb_004108_120 Hb_004108_120 Hb_171900_030--Hb_004108_120 Hb_001771_060 Hb_001771_060 Hb_171900_030--Hb_001771_060 Hb_003811_030 Hb_003811_030 Hb_006873_030--Hb_003811_030 Hb_012496_010 Hb_012496_010 Hb_006873_030--Hb_012496_010 Hb_039650_030 Hb_039650_030 Hb_006873_030--Hb_039650_030 Hb_113396_020 Hb_113396_020 Hb_006873_030--Hb_113396_020 Hb_035677_010 Hb_035677_010 Hb_006873_030--Hb_035677_010 Hb_000247_150 Hb_000247_150 Hb_006873_030--Hb_000247_150 Hb_004712_140 Hb_004712_140 Hb_005545_080--Hb_004712_140 Hb_000117_110 Hb_000117_110 Hb_005545_080--Hb_000117_110 Hb_004924_030 Hb_004924_030 Hb_005545_080--Hb_004924_030 Hb_005545_080--Hb_000297_100 Hb_010327_010 Hb_010327_010 Hb_005545_080--Hb_010327_010 Hb_001677_130 Hb_001677_130 Hb_005545_080--Hb_001677_130 Hb_078901_010 Hb_078901_010 Hb_002097_120--Hb_078901_010 Hb_000116_350 Hb_000116_350 Hb_002097_120--Hb_000116_350 Hb_002097_120--Hb_000434_050 Hb_002097_120--Hb_000307_110 Hb_090306_010 Hb_090306_010 Hb_002097_120--Hb_090306_010 Hb_000245_270 Hb_000245_270 Hb_002097_120--Hb_000245_270
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0225696 0.365208 0.069581 0.0195336 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0406664 0 0 0.083096

CAGE analysis