Hb_000649_160

Information

Type -
Description -
Location Contig649: 164798-166139
Sequence    

Annotation

kegg
ID rcu:RCOM_0597860
description diphosphoinositol polyphosphate phosphohydrolase, putative (EC:3.6.1.52)
nr
ID XP_012072296.1
description PREDICTED: nudix hydrolase 18, mitochondrial [Jatropha curcas]
swissprot
ID Q9LQU5
description Nudix hydrolase 18, mitochondrial OS=Arabidopsis thaliana GN=NUDT18 PE=2 SV=1
trembl
ID A0A067L1Y6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04752 PE=3 SV=1
Gene Ontology
ID GO:0008486
description nudix hydrolase mitochondrial-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000649_160 0.0 - - PREDICTED: nudix hydrolase 18, mitochondrial [Jatropha curcas]
2 Hb_029866_050 0.1077585813 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor CRF4 [Jatropha curcas]
3 Hb_006698_020 0.1205380767 - - hypothetical protein JCGZ_04585 [Jatropha curcas]
4 Hb_001104_270 0.1250881823 - - hypothetical protein POPTR_0007s13980g [Populus trichocarpa]
5 Hb_001568_120 0.1324907969 - - hypothetical protein JCGZ_05918 [Jatropha curcas]
6 Hb_013720_010 0.1409364341 - - Putative DNA repair RAD23-3 -like protein [Gossypium arboreum]
7 Hb_007254_050 0.146936646 - - PREDICTED: U-box domain-containing protein 28-like [Jatropha curcas]
8 Hb_000000_070 0.1494067232 - - allene oxide synthase [Hevea brasiliensis]
9 Hb_174380_010 0.1496191343 - - kinase, putative [Ricinus communis]
10 Hb_007441_150 0.1510575316 - - Ankyrin repeat family protein [Theobroma cacao]
11 Hb_002234_200 0.1527359455 - - PREDICTED: inactive rhomboid protein 1 [Jatropha curcas]
12 Hb_001477_080 0.1529345777 - - hypothetical protein POPTR_0017s04860g [Populus trichocarpa]
13 Hb_009683_010 0.1535375187 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
14 Hb_009476_010 0.1567089017 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 29 [Jatropha curcas]
15 Hb_008667_030 0.1567410596 - - PREDICTED: premnaspirodiene oxygenase-like [Jatropha curcas]
16 Hb_003914_050 0.1568708348 - - PREDICTED: uncharacterized protein LOC104445137 [Eucalyptus grandis]
17 Hb_032260_100 0.1599267188 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 53 [Jatropha curcas]
18 Hb_000836_220 0.160488823 - - UDP-glucosyltransferase, putative [Ricinus communis]
19 Hb_000571_030 0.161107231 - - ammonium transporter, putative [Ricinus communis]
20 Hb_018043_010 0.1613234237 - - PREDICTED: auxin-induced protein 15A-like [Jatropha curcas]

Gene co-expression network

sample Hb_000649_160 Hb_000649_160 Hb_029866_050 Hb_029866_050 Hb_000649_160--Hb_029866_050 Hb_006698_020 Hb_006698_020 Hb_000649_160--Hb_006698_020 Hb_001104_270 Hb_001104_270 Hb_000649_160--Hb_001104_270 Hb_001568_120 Hb_001568_120 Hb_000649_160--Hb_001568_120 Hb_013720_010 Hb_013720_010 Hb_000649_160--Hb_013720_010 Hb_007254_050 Hb_007254_050 Hb_000649_160--Hb_007254_050 Hb_029866_050--Hb_006698_020 Hb_000003_420 Hb_000003_420 Hb_029866_050--Hb_000003_420 Hb_029866_050--Hb_001568_120 Hb_000359_080 Hb_000359_080 Hb_029866_050--Hb_000359_080 Hb_000473_080 Hb_000473_080 Hb_029866_050--Hb_000473_080 Hb_006698_020--Hb_013720_010 Hb_008667_030 Hb_008667_030 Hb_006698_020--Hb_008667_030 Hb_000000_070 Hb_000000_070 Hb_006698_020--Hb_000000_070 Hb_000331_710 Hb_000331_710 Hb_006698_020--Hb_000331_710 Hb_002529_080 Hb_002529_080 Hb_006698_020--Hb_002529_080 Hb_001104_270--Hb_013720_010 Hb_004112_050 Hb_004112_050 Hb_001104_270--Hb_004112_050 Hb_000060_100 Hb_000060_100 Hb_001104_270--Hb_000060_100 Hb_002218_080 Hb_002218_080 Hb_001104_270--Hb_002218_080 Hb_004899_360 Hb_004899_360 Hb_001104_270--Hb_004899_360 Hb_035677_010 Hb_035677_010 Hb_001104_270--Hb_035677_010 Hb_001568_120--Hb_000000_070 Hb_117127_010 Hb_117127_010 Hb_001568_120--Hb_117127_010 Hb_001568_120--Hb_006698_020 Hb_009683_010 Hb_009683_010 Hb_001568_120--Hb_009683_010 Hb_041145_010 Hb_041145_010 Hb_001568_120--Hb_041145_010 Hb_013720_010--Hb_000331_710 Hb_000247_150 Hb_000247_150 Hb_013720_010--Hb_000247_150 Hb_000027_060 Hb_000027_060 Hb_013720_010--Hb_000027_060 Hb_013720_010--Hb_008667_030 Hb_004393_030 Hb_004393_030 Hb_007254_050--Hb_004393_030 Hb_003905_040 Hb_003905_040 Hb_007254_050--Hb_003905_040 Hb_000054_140 Hb_000054_140 Hb_007254_050--Hb_000054_140 Hb_004837_110 Hb_004837_110 Hb_007254_050--Hb_004837_110 Hb_000985_140 Hb_000985_140 Hb_007254_050--Hb_000985_140 Hb_004116_150 Hb_004116_150 Hb_007254_050--Hb_004116_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.72539 0.552091 0.557912 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0807578 0 0.16571 0.155988

CAGE analysis