Hb_008021_010

Information

Type transcription factor
Description TF Family: bZIP
Location Contig8021: 12531-13127
Sequence    

Annotation

kegg
ID rcu:RCOM_0366100
description Ocs element-binding factor, putative
nr
ID XP_002533570.1
description Ocs element-binding factor, putative [Ricinus communis]
swissprot
ID Q9FMC2
description Basic leucine zipper 43 OS=Arabidopsis thaliana GN=BZIP43 PE=1 SV=1
trembl
ID B9T5Q1
description Ocs element-binding factor, putative OS=Ricinus communis GN=RCOM_0366100 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_58853: 11899-12162
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008021_010 0.0 transcription factor TF Family: bZIP Ocs element-binding factor, putative [Ricinus communis]
2 Hb_005375_070 0.1350188053 transcription factor TF Family: MYB-related PREDICTED: protein LHY [Jatropha curcas]
3 Hb_001898_010 0.1424511063 - - hypothetical protein JCGZ_00222 [Jatropha curcas]
4 Hb_002375_060 0.1471060851 - - PREDICTED: uncharacterized protein LOC105628271 [Jatropha curcas]
5 Hb_002849_110 0.1502660443 - - hypothetical protein JCGZ_14362 [Jatropha curcas]
6 Hb_023386_050 0.1517069823 - - conserved hypothetical protein [Ricinus communis]
7 Hb_172676_010 0.1536921223 - - PREDICTED: putative disease resistance protein At3g14460 [Jatropha curcas]
8 Hb_001405_060 0.1557634063 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 4-like [Jatropha curcas]
9 Hb_008380_010 0.1560153291 - - PREDICTED: PRA1 family protein B4-like [Camelina sativa]
10 Hb_000836_210 0.156303977 - - hypothetical protein JCGZ_14362 [Jatropha curcas]
11 Hb_000391_060 0.1568564723 - - PREDICTED: uncharacterized protein LOC104445137 [Eucalyptus grandis]
12 Hb_000365_340 0.1673253178 - - PREDICTED: uncharacterized protein LOC105649067 [Jatropha curcas]
13 Hb_003633_150 0.1681534144 - - hypothetical protein JCGZ_23296 [Jatropha curcas]
14 Hb_098160_010 0.1684992038 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like isoform X2 [Jatropha curcas]
15 Hb_071072_010 0.168563544 - - PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
16 Hb_007574_050 0.1705133954 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g68400 [Jatropha curcas]
17 Hb_005000_050 0.1710437839 - - PREDICTED: tetraspanin-2 [Jatropha curcas]
18 Hb_000402_030 0.1714748456 - - PREDICTED: cysteine-rich receptor-like protein kinase 2 [Jatropha curcas]
19 Hb_006911_020 0.1715192958 - - CC-NBS-LRR protein isoform 1 [Theobroma cacao]
20 Hb_006052_060 0.1722700764 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]

Gene co-expression network

sample Hb_008021_010 Hb_008021_010 Hb_005375_070 Hb_005375_070 Hb_008021_010--Hb_005375_070 Hb_001898_010 Hb_001898_010 Hb_008021_010--Hb_001898_010 Hb_002375_060 Hb_002375_060 Hb_008021_010--Hb_002375_060 Hb_002849_110 Hb_002849_110 Hb_008021_010--Hb_002849_110 Hb_023386_050 Hb_023386_050 Hb_008021_010--Hb_023386_050 Hb_172676_010 Hb_172676_010 Hb_008021_010--Hb_172676_010 Hb_005375_070--Hb_001898_010 Hb_000402_030 Hb_000402_030 Hb_005375_070--Hb_000402_030 Hb_017857_010 Hb_017857_010 Hb_005375_070--Hb_017857_010 Hb_005000_050 Hb_005000_050 Hb_005375_070--Hb_005000_050 Hb_002343_020 Hb_002343_020 Hb_005375_070--Hb_002343_020 Hb_149484_010 Hb_149484_010 Hb_005375_070--Hb_149484_010 Hb_001898_010--Hb_000402_030 Hb_004712_160 Hb_004712_160 Hb_001898_010--Hb_004712_160 Hb_007574_050 Hb_007574_050 Hb_001898_010--Hb_007574_050 Hb_098160_010 Hb_098160_010 Hb_001898_010--Hb_098160_010 Hb_009476_110 Hb_009476_110 Hb_001898_010--Hb_009476_110 Hb_002375_060--Hb_023386_050 Hb_000366_050 Hb_000366_050 Hb_002375_060--Hb_000366_050 Hb_164926_050 Hb_164926_050 Hb_002375_060--Hb_164926_050 Hb_029576_010 Hb_029576_010 Hb_002375_060--Hb_029576_010 Hb_000836_320 Hb_000836_320 Hb_002375_060--Hb_000836_320 Hb_000836_210 Hb_000836_210 Hb_002849_110--Hb_000836_210 Hb_001405_060 Hb_001405_060 Hb_002849_110--Hb_001405_060 Hb_005282_010 Hb_005282_010 Hb_002849_110--Hb_005282_010 Hb_000373_250 Hb_000373_250 Hb_002849_110--Hb_000373_250 Hb_000087_100 Hb_000087_100 Hb_002849_110--Hb_000087_100 Hb_004282_040 Hb_004282_040 Hb_002849_110--Hb_004282_040 Hb_001123_170 Hb_001123_170 Hb_023386_050--Hb_001123_170 Hb_000100_210 Hb_000100_210 Hb_023386_050--Hb_000100_210 Hb_003656_170 Hb_003656_170 Hb_023386_050--Hb_003656_170 Hb_002324_050 Hb_002324_050 Hb_023386_050--Hb_002324_050 Hb_023386_050--Hb_005000_050 Hb_005539_100 Hb_005539_100 Hb_172676_010--Hb_005539_100 Hb_006052_060 Hb_006052_060 Hb_172676_010--Hb_006052_060 Hb_002073_020 Hb_002073_020 Hb_172676_010--Hb_002073_020 Hb_002874_170 Hb_002874_170 Hb_172676_010--Hb_002874_170 Hb_061908_020 Hb_061908_020 Hb_172676_010--Hb_061908_020 Hb_001951_240 Hb_001951_240 Hb_172676_010--Hb_001951_240
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.242605 6.76914 3.47783 3.62379 0.170482 0.585636
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.55892 1.24632 1.54601

CAGE analysis