Hb_006736_010

Information

Type -
Description -
Location Contig6736: 3738-11131
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006736_010 0.0 - - -
2 Hb_170193_030 0.1830172138 - - PREDICTED: probable disease resistance protein At5g63020 [Jatropha curcas]
3 Hb_006111_090 0.1843674786 - - hypothetical protein JCGZ_26825 [Jatropha curcas]
4 Hb_002863_080 0.1946894014 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At5g63020 [Jatropha curcas]
5 Hb_000808_220 0.2006083025 - - PREDICTED: pyrophosphate-energized vacuolar membrane proton pump 1-like [Jatropha curcas]
6 Hb_003497_020 0.2015653444 transcription factor TF Family: MYB MYB transcriptional factor [Populus nigra]
7 Hb_000215_250 0.2076558884 - - Acid phosphatase 1 precursor, putative [Ricinus communis]
8 Hb_001091_020 0.211012313 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
9 Hb_000917_120 0.2117632725 - - conserved hypothetical protein [Ricinus communis]
10 Hb_006120_030 0.2128717346 - - -
11 Hb_003847_170 0.2166233032 - - PREDICTED: trehalase isoform X1 [Jatropha curcas]
12 Hb_000011_120 0.2168480114 - - PREDICTED: ATPase 10, plasma membrane-type-like [Populus euphratica]
13 Hb_009659_040 0.2203243131 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein NUTCRACKER [Populus euphratica]
14 Hb_002640_040 0.222418914 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
15 Hb_029576_080 0.2245770576 - - Aspartic proteinase precursor, putative [Ricinus communis]
16 Hb_001014_150 0.2259432488 - - zinc finger protein, putative [Ricinus communis]
17 Hb_002490_090 0.2270422861 - - PREDICTED: uncharacterized protein LOC105133003 [Populus euphratica]
18 Hb_109489_010 0.2302610736 - - multidrug resistance-associated protein 2, 6 (mrp2, 6), abc-transoprter, putative [Ricinus communis]
19 Hb_000403_110 0.23044053 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 51 [Jatropha curcas]
20 Hb_004223_180 0.2329426541 - - PREDICTED: auxin-induced protein 15A [Jatropha curcas]

Gene co-expression network

sample Hb_006736_010 Hb_006736_010 Hb_170193_030 Hb_170193_030 Hb_006736_010--Hb_170193_030 Hb_006111_090 Hb_006111_090 Hb_006736_010--Hb_006111_090 Hb_002863_080 Hb_002863_080 Hb_006736_010--Hb_002863_080 Hb_000808_220 Hb_000808_220 Hb_006736_010--Hb_000808_220 Hb_003497_020 Hb_003497_020 Hb_006736_010--Hb_003497_020 Hb_000215_250 Hb_000215_250 Hb_006736_010--Hb_000215_250 Hb_001663_120 Hb_001663_120 Hb_170193_030--Hb_001663_120 Hb_170193_030--Hb_000215_250 Hb_003847_170 Hb_003847_170 Hb_170193_030--Hb_003847_170 Hb_001963_020 Hb_001963_020 Hb_170193_030--Hb_001963_020 Hb_003562_030 Hb_003562_030 Hb_170193_030--Hb_003562_030 Hb_001493_020 Hb_001493_020 Hb_170193_030--Hb_001493_020 Hb_008226_120 Hb_008226_120 Hb_006111_090--Hb_008226_120 Hb_000236_050 Hb_000236_050 Hb_006111_090--Hb_000236_050 Hb_009785_010 Hb_009785_010 Hb_006111_090--Hb_009785_010 Hb_000034_030 Hb_000034_030 Hb_006111_090--Hb_000034_030 Hb_005237_040 Hb_005237_040 Hb_006111_090--Hb_005237_040 Hb_006111_090--Hb_003497_020 Hb_000137_060 Hb_000137_060 Hb_002863_080--Hb_000137_060 Hb_000054_110 Hb_000054_110 Hb_002863_080--Hb_000054_110 Hb_046998_010 Hb_046998_010 Hb_002863_080--Hb_046998_010 Hb_003097_050 Hb_003097_050 Hb_002863_080--Hb_003097_050 Hb_007382_070 Hb_007382_070 Hb_002863_080--Hb_007382_070 Hb_001085_230 Hb_001085_230 Hb_000808_220--Hb_001085_230 Hb_109489_010 Hb_109489_010 Hb_000808_220--Hb_109489_010 Hb_001946_060 Hb_001946_060 Hb_000808_220--Hb_001946_060 Hb_001675_130 Hb_001675_130 Hb_000808_220--Hb_001675_130 Hb_007919_030 Hb_007919_030 Hb_000808_220--Hb_007919_030 Hb_000377_160 Hb_000377_160 Hb_000808_220--Hb_000377_160 Hb_006002_010 Hb_006002_010 Hb_003497_020--Hb_006002_010 Hb_003497_020--Hb_008226_120 Hb_004544_090 Hb_004544_090 Hb_003497_020--Hb_004544_090 Hb_001894_040 Hb_001894_040 Hb_003497_020--Hb_001894_040 Hb_000037_010 Hb_000037_010 Hb_003497_020--Hb_000037_010 Hb_000417_280 Hb_000417_280 Hb_003497_020--Hb_000417_280 Hb_002420_010 Hb_002420_010 Hb_000215_250--Hb_002420_010 Hb_002811_020 Hb_002811_020 Hb_000215_250--Hb_002811_020 Hb_013848_030 Hb_013848_030 Hb_000215_250--Hb_013848_030 Hb_003092_050 Hb_003092_050 Hb_000215_250--Hb_003092_050 Hb_000215_250--Hb_001493_020 Hb_082683_010 Hb_082683_010 Hb_000215_250--Hb_082683_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0477275 0.0169442 0.0332286 0.0222462 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.102888 0.0418666

CAGE analysis